Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3662 |
Symbol | |
ID | 6117996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4464796 |
End bp | 4466034 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635213 |
Product | galactokinase |
Protein accession | YP_001762019 |
Protein GI | 170727993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0153] Galactokinase |
TIGRFAM ID | [TIGR00131] galactokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0296405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGGC TTGCTATGGC GAGTGTTGGT AATTTAAAAG AAGGATTTAT CGTGGATCTT TATAAACTAT TTGAGCAATT TGAGTCACTT TTTTCCAGAA CTGTCGAGGG GGTTAGCAGT GCGCCGGGAA GAGTTAATTT AATTGGCGAA TTTACCGATT ATAATGATGG ATATGTTCTG CCTTGCGCTT TGCCGTTCAG AACTTATGTG GCTTATCGTA AGCGTAGCGA TAATATCATT ATGGCTTATT CTACAAACTA TCCAGATGAG TGCGAGGCGT TTGAGCTGGC TCCAGCAATC TCACATGGGA TGAGCCACTG GGGGAACTAT ATTCGTGCGA TAGCATATGT TTATAAAATG GCAGGTTATC AGTTAGGTGG CATGGACATT TTGATTAGCT CCAATGTGCC ACAGGGGGCG GGTTTATCAT CATCTGCGGC GTTAGAGGTG GCGTTAGGTG GCGCTATAAA TCAAGCTTTT GAACTTGACT TGACCCTTGA GAAGATTGCG CTTTTAGGTC AGCAGGCTGA AAATTACTTT TTAGGTTGTC AGTGTGGGAT CATGGATCAA CTGGTTTCAG CGAAAGCCAT TAAAAATCAA GCCCTGATGA TTGACTGCAT GAGCCTTGCT ATTGAACATT TCTCTGTTCC AGAAGAGTTG GCATTAATTG TTATTAACTC TAATTTTCCG CGTAAGTTAG TTGAAAGCGA ATATAACCAG CGTCGCAGAG ACTGCATGAA TGCGGCGGCA AAGATGGGAG TTTCAACCTT ACGTCAAGCG AGTTTGAGTC TGCTTGAGGA GAGTAGGGCC TTGATGACGC TAAATGAGTA TAAGCGTGCT CACCATGTTA TCACTGAAAA CCGCCGTGTA TTGCAAGCCG CGAAAGCCCT GCAAGATAAT AATCTGGAAG TGCTTAGCGA ACTGATGGCT GAGTCGCACA CCTCACTACG GGATAATTTT GAGGTTACCG TCGCCGTTAC TGATGGTTTA GTGGATATTT GTCATAGTGC ATTGGGAGCA GATTGTGCGA CTCGGATGAC GGGTGGTGGT TTTGGCGGTG CGGTCATCTG TATTTGTCGT CATGGGGATG TACCTAAGAT TGTTGAGGCA GTTTCAAGCC AGTACAATAA ATACTTTGGT TTACAGGAGA CTATCTATGT TGTTAATGCG GCTGGTGGCT TAATGACGAC CTTAGGCACA AGCAGGTCAG CTCTAGTGAA CGAGGAGTTC TTACCATGA
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Protein sequence | MIRLAMASVG NLKEGFIVDL YKLFEQFESL FSRTVEGVSS APGRVNLIGE FTDYNDGYVL PCALPFRTYV AYRKRSDNII MAYSTNYPDE CEAFELAPAI SHGMSHWGNY IRAIAYVYKM AGYQLGGMDI LISSNVPQGA GLSSSAALEV ALGGAINQAF ELDLTLEKIA LLGQQAENYF LGCQCGIMDQ LVSAKAIKNQ ALMIDCMSLA IEHFSVPEEL ALIVINSNFP RKLVESEYNQ RRRDCMNAAA KMGVSTLRQA SLSLLEESRA LMTLNEYKRA HHVITENRRV LQAAKALQDN NLEVLSELMA ESHTSLRDNF EVTVAVTDGL VDICHSALGA DCATRMTGGG FGGAVICICR HGDVPKIVEA VSSQYNKYFG LQETIYVVNA AGGLMTTLGT SRSALVNEEF LP
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