Gene Swoo_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3627 
Symbol 
ID6117961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4421888 
End bp4422865 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID641635180 
Producthypothetical protein 
Protein accessionYP_001761986 
Protein GI170727960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.92162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC CCAGAAGAAC ACAAATGAGC ATTGAAGACA CGTCTTGGTA CCATTGTTGT 
TCAAGAGTGA CACGCCGTGC CCGTCTATTT GGAAATGATG AGCTTACGGG AAAGAATTAT
GATTATAGAC GTGATTGGGT TGAGTCTCTG CTACTCAAGT TAGGTGATAT TTTTGCTATT
GATGTAGCGG CTTATGCGGT GATGTCTAAT CATCTTCATT TGGTATTACA GATAGATATA
GAGTTAGCGA ATCGTTGGAC GGATAGAGAA GTCGTAGAGC AGTGGCATCA ACTGTTTAAC
GGTACCGAGT TGACTCAAAG GTTTGCTAAG GGTGAAGTGA TAGAAGAGTA CCAAGTTGCT
AAGTTAAAAC ACCTTGTTGC CATTTACCGC TCACGCTTAT GTGATATATC TTGGTTTATG
AGGTGTCTTA ATGAGCCAAT TGCTCGTATG GCAAATAAGA AGGACAAGTG TACAGGCCGA
TTCTGGGAGG GAAGGTTTAA GAGTCAAGCC TTGCTTGATG AAGCGGCGGT GTTGGCCTGT
ATGGCTTATG TTGAGCTCAA CCCTATTCGA GCTCAAATGG CTGATACACT TGAGAGTTCA
GACAACACGA GTATACAACT TAGAGTAAAT GCTGCGTTGA AAGGAGAGCA ACCCACTCAA
TTACTGCCCT TTATTGGAGA TGAGCGGCTT AATCAACCTA AAGGCATCAA TTTTGCCCTA
AAAGACTACC TAGAATTAGT AGATGAAACA GGCAGAATTA TCCGTAATGA CAAGAGAGGT
TCTATCTCTG CTAACAGCAC AAAGATACTG ACGCGGTTGA ATATTTCATC GGACAACTGG
ATAAAGCTCA CCTCAGAGTT TGGCGAACTG TTTCGCGGCC CTGTTGGCAA CACGCAAGAA
TTAACATCTT TTTGTGAGCA CCTTCAAAAG CGTCGACGAC ACTTTGCAAA GTGTTGCAAG
TATCTTGAAG ATGGTTAA
 
Protein sequence
MPRPRRTQMS IEDTSWYHCC SRVTRRARLF GNDELTGKNY DYRRDWVESL LLKLGDIFAI 
DVAAYAVMSN HLHLVLQIDI ELANRWTDRE VVEQWHQLFN GTELTQRFAK GEVIEEYQVA
KLKHLVAIYR SRLCDISWFM RCLNEPIARM ANKKDKCTGR FWEGRFKSQA LLDEAAVLAC
MAYVELNPIR AQMADTLESS DNTSIQLRVN AALKGEQPTQ LLPFIGDERL NQPKGINFAL
KDYLELVDET GRIIRNDKRG SISANSTKIL TRLNISSDNW IKLTSEFGEL FRGPVGNTQE
LTSFCEHLQK RRRHFAKCCK YLEDG