| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3618 |
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| Symbol | |
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| ID | 6117952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4413474 |
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| End bp | 4413983 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635171 |
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| Product | S-ribosylhomocysteinase |
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| Protein accession | YP_001761977 |
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| Protein GI | 170727951 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.16033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAC TGGATAGTTT TACCGTTGAT CATACCCGAA TGAATGCACC TGCAGTTCGT
GTAGCTAAAA CCATGAAGAG CCCCTCTGGT GATACCATTA CTGTCTTTGA TCTGCGTTTT
TGTGCCCCGA ATAAAGATAT CCTAAGTGAG CGTGGGATCC ATACCCTAGA GCATCTCTAC
GCAGGCTTTA TGCGTAACCA CCTTAATGGC GATAACGTTG AGATTATCGA TATCTCTCCG
ATGGGGTGTC GCACCGGCTT TTACATGAGC TTAATCGGCT CGCCAAAAGA GGCTGATGTG
GCAGAAGCTT GGCTTGCTTC TATGAATGAT GTGCTCACTG TTGCATCGCA ATCGGAGATC
CCTGAGCTCA ATGAGTACCA GTGCGGTACA TTTAATATGC ATTCGCTCGA GCAAGCACAG
GGGATCGCGC GTTCGATTAT TGCTTCAGGG ATCAGTGTTA ACAAGAATGA TGAGCTGAAA
TTAAGTGAGA AGATCCTTAA GGGTCTATAA
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| Protein sequence | MPLLDSFTVD HTRMNAPAVR VAKTMKSPSG DTITVFDLRF CAPNKDILSE RGIHTLEHLY
AGFMRNHLNG DNVEIIDISP MGCRTGFYMS LIGSPKEADV AEAWLASMND VLTVASQSEI
PELNEYQCGT FNMHSLEQAQ GIARSIIASG ISVNKNDELK LSEKILKGL
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