Gene Swoo_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3593 
Symbol 
ID6117927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4385608 
End bp4387560 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content44% 
IMG OID641635146 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_001761952 
Protein GI170727926 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACC CTAGAATTAC AACCCTGTTT ATCGCGCTAG CGGTAACAGT TAGCGGCGCA 
TGTCTCGCCA ATCCATACGA CAAAATAACA AAATATCATG CCAACAATCC TACACCTAGG
ATCATAGGAG GCGAAGACGC ACAAAAAAGC GAATTCCCAT TTATGGCATC TCTTATCAGC
TCATCCACAC CAACAACAGG TTCAGTCCAG CCTTTTTGCG GCGGGTCGTT AATAACCAAA
AGGTTTGTCC TCACTGCCGC CCACTGTGTT CAAGGTGGAA AAGCAAGTCC AGCCTCAATT
GATGTACTTA TCGGACTCCA TGATGTAAAT GCACCTAGTG AGGCTAAGCG CCATAAACTC
AAGAAAATAT ATGGAGACGC CCAAACAGAT ACCGCCCTTC TGGAGCTGCA AGAACCAGTA
GAAGGGATCA CTCCCATCAA ACTTATCACG CCTGAGCTGG CAGCACAGCT AAAAGATGGC
GATATGATGA CAGTCATAGG TTTCGGAGTC ACGATTGAGA ATGAAGAGAG ACCAGTTGCA
AAAATACTTC AAAAAGCAGA TGTGCCCCAG TTTAATCAAG CATTATGCAA TAAAAACTAT
CAAGAATTAG TGGGTTCAAG AGTCAATGAA TTTATGATCT GTGCTGGCTA CGCAAAAATA
AAAAAAGACT CATGTAATGG CGACAGCGGT GGACCACTAT TTATGAAGAA AGGTGGTGAG
TTATACCAAA CAGGGGTTGT CAGTTGGGGC GCCCAGGTTT GTGCCAGCGA TAATCTTCCC
GGCGTCTATG TCAGGGTGTC AAAAATGCTC GATTGGCTGT ACGAGCGTTC TGCAGGCCTA
GACTTCGATA GAGATATGAA CCTTGGCTAT TTAGAGTTAG AACAACAAGC AGTCCACACT
CTTAACATCG ATAATAACAG CGAGCATAGC TTTGTGATTA ACAAGGTTGA ATTTAACGAT
TTAGACAATC TTGCAACCCC TGAAATTGTT AAAAACAACT GCAATTCAAC TGAAGTTGCA
ACGGGAAAAA GCTGCGCAAT TGAATTCAAG TTTGCTGCCA ATAAGGTTGG CCCAGCTAAA
CTCACAATGG CACTGCATAC AACTCATCCG ATGGTCAAAC TGACCAACTC AAAGGTATCG
GTCAGTATCG CAGAAAAGTC AGATCTTGAT ATGAAAAAGC TCGTCGACAT AAAACACAGT
GACTTTGTCA ATTGGCATAC TGGTGGAGAT GGGATATGGC AAGCCCAATC AGATAAAACT
GATGTTGGTG ACAGCGCGAT AGAGAGTGCA TCAGTCGATG ATGGACAAGC CGCTGGGTTA
CTAGGAGTCA TAAAAAGCGA CAGAGTCACT GAGCTTAGTT TCAGCTACCT AGTAAGCTCT
GAGTCTAACA AAGACGGGTT AAAAGTACTG GTCAATCAAA AGGAGCAATT GTTTGCATCT
GGAGATACTC AAGATGCGTT CCTCAATGTG AAACTCCCAA TGACCAAAGG CATCGATAGA
GTTGCATTCG CCTATAGCAA AGATACTGGT GGAGAAGCAG GACAAGACAG AACATACCTT
GACAACATTC AACTGACGAT TACCAATAAA GCCCCTGTTA TCAGCATTAA AAAAGTTAAG
CCGATTGAGA TAAGTCAAAG CACCACGATA GACGCAAGTG GCACCAAAGA TCCCGATGGA
GACACCTTAA CCTTTAGCTG GAAGCTAATA GGAAAAGGCA ATGGCGCGAG TTTGACTGAC
ACATCCAGTA AAGTCGCTAA GTTCAAAGCC GGAAATAAAG CTGGCAAAGT CGAGGTTGAG
CTTACGGTAA CGGATAAGTA TGGAGAAAAA TCCGTTAGCA AAGCCATGAT AGATGTTAAA
GAGGAAGATA AGGGAGGCAG CACCGACTTT ATGCTACTCC TATTAACAGC TCTTGCTATT
CTGCTCTCAA GAAGGAAAGT GCAAACTCCA TAA
 
Protein sequence
MYNPRITTLF IALAVTVSGA CLANPYDKIT KYHANNPTPR IIGGEDAQKS EFPFMASLIS 
SSTPTTGSVQ PFCGGSLITK RFVLTAAHCV QGGKASPASI DVLIGLHDVN APSEAKRHKL
KKIYGDAQTD TALLELQEPV EGITPIKLIT PELAAQLKDG DMMTVIGFGV TIENEERPVA
KILQKADVPQ FNQALCNKNY QELVGSRVNE FMICAGYAKI KKDSCNGDSG GPLFMKKGGE
LYQTGVVSWG AQVCASDNLP GVYVRVSKML DWLYERSAGL DFDRDMNLGY LELEQQAVHT
LNIDNNSEHS FVINKVEFND LDNLATPEIV KNNCNSTEVA TGKSCAIEFK FAANKVGPAK
LTMALHTTHP MVKLTNSKVS VSIAEKSDLD MKKLVDIKHS DFVNWHTGGD GIWQAQSDKT
DVGDSAIESA SVDDGQAAGL LGVIKSDRVT ELSFSYLVSS ESNKDGLKVL VNQKEQLFAS
GDTQDAFLNV KLPMTKGIDR VAFAYSKDTG GEAGQDRTYL DNIQLTITNK APVISIKKVK
PIEISQSTTI DASGTKDPDG DTLTFSWKLI GKGNGASLTD TSSKVAKFKA GNKAGKVEVE
LTVTDKYGEK SVSKAMIDVK EEDKGGSTDF MLLLLTALAI LLSRRKVQTP