Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3582 |
Symbol | |
ID | 6117916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4374061 |
End bp | 4375197 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635135 |
Product | chaperone protein DnaJ |
Protein accession | YP_001761941 |
Protein GI | 170727915 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000132577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.338905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAAGC GAGATTATTA CGAAGTACTA AGTGTTGGAC GTGATGCCAG CGAACGTGAA ATTAAAAAGG CTTACAAGCG TTTAGCCATG AAGTTTCACC CGGATCGCAA TCCAGGAGAT AAAGCTGCTG AAACCAGCTT TAAAGAGGTT AAAGAAGCCT ACGAAATCCT GACTGATAGC GATAAAAAAG CCGCCTATGA CCAGTTTGGT CATGCAGGTG TTGATCCAAA TCGCGGTGGC GGTGGATTCG GTGGTAATGC CGATTTCGGC GATGTATTCG GCGATGTGTT CGGCGATATC TTCGGCGGTG GACGTCGTGG TGGCGGTCAA CGTCAAGCAG CACGTGGTAG CGACCTGCGT TACAACCTTG AACTCTCTCT TGAAGAGGCT GTTAAAGGTT TGACTAAAGA GCTACGCATT CCAACTTTGG CTCATTGTGA TACTTGTGAT GGCAGCGGCG CTAAGAAAGG CACATCGCCT ACCACTTGTG GTACCTGTCA TGGTCAAGGC CAAGTGCAGA TGCGTCAGGG ATTCTTTGCG GTTCAGCAAG CCTGTCCGAC CTGTCATGGT CGCGGTAAGA TCATTAAAGA CCCATGTAAT TCATGTCATG GCGAAGGTCG TGTTGAGAAG AGCAAGACAC TTTCAGTTAA GATCCCTGCT GGGGTTGATA ATGGCGATCG TATTCGTCTA TCTGGCGAAG GTGAAGCGGG CGAGTTTGGT GCACCTCCAG GTGATCTGTA CGTTCAGGTT AGTGTGCGTG AGCATGCTAT CTTTGTTCGT GATGGCAATA ACCTTTACTG CGAAGTGCCA ATCTCATTTG GTAAAGCAGC CCTAGGTGGT GAGATAGAGG TTCCTACTTT AGACGGTAAG GTTAATCTTA AGATCCCTGC TGAGACGCAA ACGGGTCGTA TGTTCCGTAT GCGCGGTAAA GGTGTTAAGT CTGTTCGCAG TCATGCGGTT GGCGATCTAC TTTGTAAAGT TGTGATGGAG ACGCCTGTTA AACTTAACGA ACGTCAAAAA GAGCTACTTC GCGAATTTGA TGAAACCTTA GCGGGTTCAT CGTCTAAGAA ACATAGCCCT AAAGCTGAAG GTTTCTTTGA TGGTGTGAAG AAGTTTTTTC AAGACTTAAA TAGCTAA
|
Protein sequence | MSKRDYYEVL SVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAETSFKEV KEAYEILTDS DKKAAYDQFG HAGVDPNRGG GGFGGNADFG DVFGDVFGDI FGGGRRGGGQ RQAARGSDLR YNLELSLEEA VKGLTKELRI PTLAHCDTCD GSGAKKGTSP TTCGTCHGQG QVQMRQGFFA VQQACPTCHG RGKIIKDPCN SCHGEGRVEK SKTLSVKIPA GVDNGDRIRL SGEGEAGEFG APPGDLYVQV SVREHAIFVR DGNNLYCEVP ISFGKAALGG EIEVPTLDGK VNLKIPAETQ TGRMFRMRGK GVKSVRSHAV GDLLCKVVME TPVKLNERQK ELLREFDETL AGSSSKKHSP KAEGFFDGVK KFFQDLNS
|
| |