Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3575 |
Symbol | |
ID | 6117909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4363594 |
End bp | 4364253 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641635128 |
Product | hypothetical protein |
Protein accession | YP_001761934 |
Protein GI | 170727908 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.580348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00969465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATGA AAAAATATCT CTGCATCGCC TTAGGGCTTT CTGCAGCATT TAACTACTCC TCCCTTGCTC ATGCAACTGA AGGATTATCG GCTAATATCG GTGTTACCAA TAACTACGTT TGGAGAGGCG TCACTCAAAC AGATGATAAA CCTGCTGTTT CTGGAGGGAT TGATTACGCA TCAGAGATGG GCGTCTATGT TGGAACCTGG GCATCTAATG TAGATTTTGG TGATGATGCC TCAACCGAGT TAGATCTCTA CCTAGGTTTT GCTAATGATG TAGGTGAATT CAGTTATGAT TTTGGCTATG TCTATTACGG TTATCCCGAT GGCGATGAAC TCGACTTCGG TGAAGTATAT GGCTCCCTTT CCTGGAACTT CCTCTCAGTT GGCGTATCAA CAACCGCCCA TTCAGATTGG TCATCAGATT TTGGCGATGA TATCTATGTT GAAGCTAATC TGACCTTCGA AATATTAGGT GACGTTGAAT TAGGGCTACA TGCAGGTAGT TATAATTTCG ATGATGGTCT CGACTATCAA GATTATAATA TCAGTCTTAG TAAGAGTGGG TTTAGCTTTA TGCTGAGCCA AGTGAGCGAA GATGAGATTG ATGATGATTA CAAGGTCATC ATTAGTTTTA CTCACGAAAT CGACCTTTAA
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Protein sequence | MKMKKYLCIA LGLSAAFNYS SLAHATEGLS ANIGVTNNYV WRGVTQTDDK PAVSGGIDYA SEMGVYVGTW ASNVDFGDDA STELDLYLGF ANDVGEFSYD FGYVYYGYPD GDELDFGEVY GSLSWNFLSV GVSTTAHSDW SSDFGDDIYV EANLTFEILG DVELGLHAGS YNFDDGLDYQ DYNISLSKSG FSFMLSQVSE DEIDDDYKVI ISFTHEIDL
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