| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3549 |
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| Symbol | |
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| ID | 6117881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4332280 |
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| End bp | 4333053 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635100 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_001761908 |
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| Protein GI | 170727882 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0216784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000418325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGATT TAAAAAAAGC AGCGCAGAAA GCGATTGAGC TGATGGATCT TACCACTCTC
AATGATGATG ATACTGATCA GAAAGTGATT GAGCTTTGTC ATAAAGCTAA GACTCCTGCC
GGAAATACCG CAGCTATCTG TATCTATCCA AGGTTTATTC CTATTGCGCG CAAGACGCTT
AATGAGCTTG GTTGTGAAGA TATCAAAATT GCCACTGTCA CTAACTTCCC ACACGGTAAC
GATGATATTG CCATTGCGGT ACTAGAGACA CGTGCAGCGG TTGCTTACGG CGCTGATGAA
GTCGATGTGG TTTTCCCATA CCGCTCATTG ATGGAAGGCA ATGAAACTCT TGGCTTTGAG
CTTGTGAAGG CCTGTAAAGA AGCTTGTGGT GACGACGCGA TCCTTAAGGT GATCATCGAG
TCTGGTGTAC TAGAAGACCC AGCACTTATT CGTAAAGCGT CTGAGCTTTG TATCGATGCC
GGTGCAGACT TCATCAAGAC CTCTACTGGT AAAGTGCCAG TTAACGCGAC CATTGAAGCG
GCTGAGATCA TGATGACAGT GATCAGTGAA AAGAACACTA AAGTGGGCTT TAAGCCAGCA
GGTGGAGTAC GTGATGCTGC TGCCGCTGGT GAGTTCCTTG GTCTTGCAGC TCGCCTTTTA
GGTGATGACT GGGCTACTCC TGCGACCTTC CGTTTCGGTG CGTCAAGCTT ATTGGTTAAC
CTGCTTCACA CCTTAGAGTT AGGTGAAGAA GCTAAAGGCC CACAGGGCTA CTAA
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| Protein sequence | MSDLKKAAQK AIELMDLTTL NDDDTDQKVI ELCHKAKTPA GNTAAICIYP RFIPIARKTL
NELGCEDIKI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRSL MEGNETLGFE
LVKACKEACG DDAILKVIIE SGVLEDPALI RKASELCIDA GADFIKTSTG KVPVNATIEA
AEIMMTVISE KNTKVGFKPA GGVRDAAAAG EFLGLAARLL GDDWATPATF RFGASSLLVN
LLHTLELGEE AKGPQGY
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