Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3527 |
Symbol | torD |
ID | 6117859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4305600 |
End bp | 4306271 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635078 |
Product | chaperone protein TorD |
Protein accession | YP_001761886 |
Protein GI | 170727860 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00640401 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAA GTAATATGAG TGCAAGTGAA ATGAATGCTA GTGAGATGAA TAGTGTTGCA GTAGTTAATC AGGCGAGAGC TATGGTCTAT CGACTACTCT CATCTTTGTT CGCTAAGGAG GTTGATCATC AACTTCTGCA TGAATTAACC GGTGAGCAGG CACAGGCCTT TTTGGCACAA CTTGCCAGTG AGCCAGCATT CAAACAAGAT ATCGATACAT TAATATCTGT CCTGAATACG TTAAAAACTG ATAAGGCACT ACTGGAACTT GCAGCGGATT ACTGCGGCTT GTTCCTAGTT GGAACAAAAC ACAGTGCCTC ACCTTATGCC AGCTTGTATC TTAATGAAGC TGGTAGTGAA ACACCTCTGT TTGGCGAGCA ACATCAGCAG ATGGTGCAGT TTCTAAAGCA GAGTCAGCTG CAGGTTCAAA CCAGCTTTCC AGAGCCTGCC GATCACATCG CGGTGATCTT AGCCTATGCC GAACATATCT GCCTAAACAG CGGCGATGCA GAGCAACTCA AGTTTATTGA GTCCTACCTC AATACTTGGT TAGGTAACTT TGCCGCTAAA GTGACCCAAT GCGACACAGG GACATTTTAC AGTGCCTTGG CACGCCTGAC TCAAAGCTGG GTCACTTCAG ATCTCGAAGG TCTGACCCAA ACGACTCACT AA
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Protein sequence | MNGSNMSASE MNASEMNSVA VVNQARAMVY RLLSSLFAKE VDHQLLHELT GEQAQAFLAQ LASEPAFKQD IDTLISVLNT LKTDKALLEL AADYCGLFLV GTKHSASPYA SLYLNEAGSE TPLFGEQHQQ MVQFLKQSQL QVQTSFPEPA DHIAVILAYA EHICLNSGDA EQLKFIESYL NTWLGNFAAK VTQCDTGTFY SALARLTQSW VTSDLEGLTQ TTH
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