| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3517 |
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| Symbol | |
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| ID | 6117849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4289798 |
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| End bp | 4290658 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635068 |
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| Product | peptidase U32 |
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| Protein accession | YP_001761876 |
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| Protein GI | 170727850 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT CACTCGGCCC TATTCTATAT TGCTGGCCCA AAGAGAAAGT TATTGAGTTC
TACACTCAGG TAGCCGCAAG TCAGATCCCC TTAGTTTACT TAGGGGAAAC CATCTGTAGC
CGCCGTCGTG AGTTAAAATT CAGCGACTAT ATGGACTTGG CCCATATGTT AAGGGACTCA
GGCAAGGAGG TCGTACTATC AACACTTGCT CTGCTTGAAG CTCCCTCTGA ATATACCGAA
TTAAAAAAGC AGGTAGAAAA TGGCGAATTT ATAATAGAAG CCAATGACAT GGGGGCTATT
CAGGCCGCCA AGGAGAATAA ACTTCCCTTT ATCTGCGGCC CAACCATTAA TAATTACAAC
TTAGCCAGCC TAAAGACACT TCATAAGTGG GGAATGCAGC GCTTTGTCAT GCCAGTTGAG
CTCTCTAAGC ATTGGCTTAA TACTGTAGTC TCTGTCGAAA AACCTGAGTT TGAGATAGAG
ATCTTTGGCC ATGGTTTTTT GCCTCTTGCG CTATCCGCCC GCTGCTTTAC AGCAAGGCAG
AAAGGCCTAG TCAAAGATAA GTGCCAAACA ATCTGTATCG AGAACCCTAA GGGGTTACTG
GCTCAAACTC AGGAGTCTCA ACCTCTGTTA AGGCTCAACG GCATACAGAC TCAATCTGCG
GCCTGTATCG ACCTAACTTC AGAGCTCTCT TCGATGAGTG ACATGGGGAT CAGCTACTTT
AGGGTGTCCC CATCAAGTGT TAGTTGCATA GAGAAAGCGG ATAAACTCTT TGAGTTGGGC
TCACAAAGCG TTCAAGTTGA CGACACTCAC TGTAATGGCT ATTGGCATCA ACAAGCTGGC
TTTAACCACC TGCAGATATA A
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| Protein sequence | MKASLGPILY CWPKEKVIEF YTQVAASQIP LVYLGETICS RRRELKFSDY MDLAHMLRDS
GKEVVLSTLA LLEAPSEYTE LKKQVENGEF IIEANDMGAI QAAKENKLPF ICGPTINNYN
LASLKTLHKW GMQRFVMPVE LSKHWLNTVV SVEKPEFEIE IFGHGFLPLA LSARCFTARQ
KGLVKDKCQT ICIENPKGLL AQTQESQPLL RLNGIQTQSA ACIDLTSELS SMSDMGISYF
RVSPSSVSCI EKADKLFELG SQSVQVDDTH CNGYWHQQAG FNHLQI
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