| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3514 |
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| Symbol | |
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| ID | 6117846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4286663 |
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| End bp | 4287946 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635065 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001761873 |
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| Protein GI | 170727847 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA ACTTGCTGGT TGTCGAAGAC AATAAGGCGA TAGCTTCCGT TATTGAGCAT
ATCGGTGGCT CGCTAGGTTA CCGGGTTACC ATCGCATACT CCTTTGCCGA GCTAAAAAGC
TTGCTGGTGA GTCACCATGA TTTTTTTGCC GCAACGGTGG ATTACAGCTT ACCTGATGCG
GTCGATGGCC AGGCGATTTT CCATGTACTT GAGCACAATA TTCCCTGCAT CGTGATGACT
GGAAAGATGA ATAACACCAT TCATCAGAAG CTACTTAGTC TACCTATTGT TGATTATCTA
ACAAAAGAGA ATTCACAGGC CTACCACTAT CTACTGAGAG TACTTCATGG GCAGCTAACA
AACCATGAGA TAGGTGTGTT AGTTGTCGAT GACTCACTGT CGGTGAGAAG TTATGTCTGT
AACCTATTAA GTCGAAGAAA CTTCACGCTT TATGATGTGC CTGATGGTAC TAAGGCGCTG
AATGCTTTGG CGATGCATCC TGAGATAAAG CTGATCATTA CTGATCAAGA GATGCCAGGC
ATGAATGGCA TAGAGCTGGT GCAGGCGGTG AGAAAACAGT TTGCCGATAG AGAGCTGGTG
ATAGTGGGCT ATTCAGGTAT CGATAAACCC TATCAATCAG CACGTTTTAT AAAAAGTGGT
GCAGATGATT ATCTACAGAA GCCTTTTTGT CCTGAAGAGT TCTATTGCCG CGTATTTAAA
AACGTCGAAA AATTGCAATA TATCGAAGAG ATAAAGATGG CTGCCGATAT GGACTATCTG
ACTTCGTTAT CCAATCGTCG TCATTTTATC GAGCAGTTGA CTGAGCACTT CGATGAACTA
CTCGTCAATA ATCTTGAGCA CCTGTTAATT TTTATTCATG TGGATGACTT TAAAGGGATA
AATGAGTCTT TTGGTCACAG TGGCGGTGAC AAGATATTAG TAGAGCTTGC TGAGTTGTTG
AAAAAAAGCA TTGAGCCTCC CTACCGTGCA AGGTTTGGTG GTGCGGAGTT TTGCTGTTTA
ATCTCAGGTT CAAGTTTGGT GAAAAATAGA GAGCAGGTAG AGAAACTAAC ACAGGCTGCT
AGCGCACTTT CATTCACTCT TAAAGAGCGT GAAATGTGTT TTAAAATCAG CGTCGGTGGA
GCACAGATGT GCGACAAATC AACGGTTAAA ACGTTACTGT CACAAGCCGA CACGGCATTT
CAAAAAGCGT TATCACAGGG AGGAAACAGC ACTGTTATTC ATGAAGTGCA AGAGGGGGAG
AAAGAAAAAA GTAGAGGTAG TTAA
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| Protein sequence | MMNNLLVVED NKAIASVIEH IGGSLGYRVT IAYSFAELKS LLVSHHDFFA ATVDYSLPDA
VDGQAIFHVL EHNIPCIVMT GKMNNTIHQK LLSLPIVDYL TKENSQAYHY LLRVLHGQLT
NHEIGVLVVD DSLSVRSYVC NLLSRRNFTL YDVPDGTKAL NALAMHPEIK LIITDQEMPG
MNGIELVQAV RKQFADRELV IVGYSGIDKP YQSARFIKSG ADDYLQKPFC PEEFYCRVFK
NVEKLQYIEE IKMAADMDYL TSLSNRRHFI EQLTEHFDEL LVNNLEHLLI FIHVDDFKGI
NESFGHSGGD KILVELAELL KKSIEPPYRA RFGGAEFCCL ISGSSLVKNR EQVEKLTQAA
SALSFTLKER EMCFKISVGG AQMCDKSTVK TLLSQADTAF QKALSQGGNS TVIHEVQEGE
KEKSRGS
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