| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3510 |
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| Symbol | |
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| ID | 6117842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4282181 |
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| End bp | 4283695 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635061 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001761869 |
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| Protein GI | 170727843 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATTG GCTGGTATTT AGTTCTTTTA CTGATTGTCT GTATCGCTGG TATCATTTTC
TGGTACCGGC ATAGACGGGG TGAAGCAAAA TTTATTCATG CTCTGCTACA GCAGATAGAA
CTACTTAAGA GCAAAGAGGG GGCGTTAAAT TTAGGTGATA TTCCCCCTGA ACAGCTGACA
CAACTCGATG TTCCCAAGAA ATACCTTTCC CTTTATTGTG CATGGCGTCA ATTTATCAAT
GGCTTGCCGG TCCCTAATGA TAAGGACAAG CTGACAGGGC TTGCCAACCG CTTAGGATTA
AAGTCCCGTT TTCTTACCTT GATGCCTATC ACTCAGGGCA CCTTAGTACT TATCGATATT
TATCAGTTTA GATTTGTTAA CGATCTCTTC GGTTTCTCCG TTGGCGATAA GTTGCTGCAG
ATCTTATCTG AACGATTGCA GGGAGAGGGA AATAATGTCT CATTTCTTGC ACGTATGAAT
GAAGATGAGT TTCTTCTCTA TTTCGAGCAA GCGCAAGATG AAGCAAAACT GCTAGCTATT
CGTGAGAAGC TTCAGATGCC GTTTAACATT CAGGATATTC CGATCACAGT TCAGATCCAG
ATGGGCTATC TGGATCTAGC TCAGCACCAT ACCTATGTGA GTCAACTTTT GAGGCGGCTC
GATCTCGCAT TGATTAAGGC TAAGGAGGAT AAGCAACTTT TTGCCAGCTA TTCAGAGGGA
GACGATCTTA GCCAGCAGCG TCAACTTGGG ATCATCAATC GACTCCCTAA GGCATTAGCC
AGAGGTGAGT TGTATATGGT GTATCAGCCA AAGTTAGATG TATTAAATGG CGGATTTAGT
CAGGTTGAGG CCTTAATACG TTGGGAGCAT GAGGATTTAG GTATGGTCTC TCCTGCTGAG
TTTATCCCCC TTGCCGAGTA CGCAGGGATG ATTGGATTAG TCAGTGAGTG GGCGCTGGAT
CAAGTGATCT CCCAGCAATA TAAGTGGCAC CAATCGGGGT TGTTATTGCA AGTTGCGGTA
AATCTCTCCT CAAAAGATAT TATCAGCAGT ACCTTATGTG ACGATATTCA GATGAAATTC
GACAAGTATG GTTTAGAGAC CAAATTGCTC TCCATTGAGA TAACCGAAAG TAAGTTGATG
GACGATATGG AGATGGCAGT TGAAACCATT GAAAAGTTGA AAGCAATTGG TGTCGATGTC
GCCATTGATG ATTTTGGTAC GGGTCACTCC TCGCTTGCTT ACCTTAAGTA TTTTCCTGTT
GATGAAGTGA AGATAGATAA GGCATTTATC GATGAACTGA TGAGTGATAA ACATGCTAAA
CACATTATGA AGTCGAGCAT AGAGCTAGCC AAGGGGCTAG ATTTTAAGGT CACAGTTGAA
GGGGTTGAGA CCGAAGAGGT TAAATCACTG CTGGTGGAGA TGGGAGTGGA TAAAATCCAA
GGCGATCTAT TTGCAAAACC GATGAGCGCG TTAGAGCTCG AAGTGAACTG GCAGCAATTG
CAACTAAGGA AGTAA
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| Protein sequence | MDIGWYLVLL LIVCIAGIIF WYRHRRGEAK FIHALLQQIE LLKSKEGALN LGDIPPEQLT
QLDVPKKYLS LYCAWRQFIN GLPVPNDKDK LTGLANRLGL KSRFLTLMPI TQGTLVLIDI
YQFRFVNDLF GFSVGDKLLQ ILSERLQGEG NNVSFLARMN EDEFLLYFEQ AQDEAKLLAI
REKLQMPFNI QDIPITVQIQ MGYLDLAQHH TYVSQLLRRL DLALIKAKED KQLFASYSEG
DDLSQQRQLG IINRLPKALA RGELYMVYQP KLDVLNGGFS QVEALIRWEH EDLGMVSPAE
FIPLAEYAGM IGLVSEWALD QVISQQYKWH QSGLLLQVAV NLSSKDIISS TLCDDIQMKF
DKYGLETKLL SIEITESKLM DDMEMAVETI EKLKAIGVDV AIDDFGTGHS SLAYLKYFPV
DEVKIDKAFI DELMSDKHAK HIMKSSIELA KGLDFKVTVE GVETEEVKSL LVEMGVDKIQ
GDLFAKPMSA LELEVNWQQL QLRK
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