Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3506 |
Symbol | |
ID | 6117838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4275749 |
End bp | 4277035 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635057 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001761865 |
Protein GI | 170727839 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTT CAGCATTTGA CCTATCCCCT CTCATTCTTG ACGCCGTTGA AGTGTGTGGA TATCAGCAGC TAACACAAGT GCAATCAAAA GTGATCCCTG TAGCTGTAAC TGGCTGTGAT CTAATGGCTT GTGCGGAAAC CGGCACCGGG AAAACTGCTG CATTTGCATT GCCACTGTTG CAAAAACTAT TGGATGAATT CTTAGATAGA AGCGCACTGA GGGGATTGAT ACTGACACCA ACACGTGAAC TTGCGATTCA GGTTGCTGAT AATATCTCAC GTTATAGCCA GTTCACTTCG CTGAAAACCT TGGCGGTTTA CGGTGGTGCA AATATGAACC CACAGCGTAA AGCGTTAAAT GCTGGTGTGG ATATCTTAGT AGCCACACCT GGACGTTTGT TCGATTTTAT CGGCCAACAT GGTTTAGACC TTTCAAGTGT TACCAGTCTT GTGATCGATG AAGCCGACAG AATGTTGGAT ATGGGCTTTG TGCGCGATAT CGAGCGTGTA AAAGGGTTGG TTGCTCGCCA ACATGTGACC CATTTCTTCT CGGCAACCTA TAGCGATGAT GTCAAATGCT TAGCACAGAA GATGCTCTGT GATCCGACAT GGATCAATGT TGCCACCAGT AAGTCGGCAT CGAGCGTCGA GCAAGAGGTT TATCTTGTCG ATAAGCGCCG TAAAGCGGAG TTACTTTCTG AGCTGGTTGG CCGCAATAAC TGGCAACAGG TGTTGGTATT TGCTAGCTCA AAAGAGAGTG CAGAGCATAT CCAGAAAGAG TTAAAGCTCG ATGGATTGAA GAGTGCTGTT TTTCACGGTG ATAAAACTCA AGGGGCACGT AATCGCGCGC TAGAGGAGTT TAAAAGCGGT GCCCTGCGTG TGCTGGTGGC CACTGATGTT GCTGCCAGAG GACTTGACAT TCACGCACTG CCTCTCGTGG TCAATATTGA GTTGCCTTTT GATGCTCAAG ATTATATTCA TCGTATTGGG CGTACAGGCC GTGCAGGTTT GACTGGACAT GCTATCTCTT TTGTCTGCCC ATCAGATGAG AAGATGCTCG AGGAGATTGA AGCGTTAATT GAGCGCAAAT TACCCCGTAT TGTCGTGCCT GGTTATGAAC AGGGCACAGC GCTTCCGGCC CGCTATCGTG ACAGTGTTGA GGTCGCGCCT AATAAGAAAC GTGTCGAGAG ACGCAAAGGC AAGCCTGCGG GGAGAAAAGA GCAAACTCGT CGCACTAAGT CCACAAGCGA TAAGAGCAGT TACTCAAGTC GTAGAAGTAA GAGATAA
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Protein sequence | MKFSAFDLSP LILDAVEVCG YQQLTQVQSK VIPVAVTGCD LMACAETGTG KTAAFALPLL QKLLDEFLDR SALRGLILTP TRELAIQVAD NISRYSQFTS LKTLAVYGGA NMNPQRKALN AGVDILVATP GRLFDFIGQH GLDLSSVTSL VIDEADRMLD MGFVRDIERV KGLVARQHVT HFFSATYSDD VKCLAQKMLC DPTWINVATS KSASSVEQEV YLVDKRRKAE LLSELVGRNN WQQVLVFASS KESAEHIQKE LKLDGLKSAV FHGDKTQGAR NRALEEFKSG ALRVLVATDV AARGLDIHAL PLVVNIELPF DAQDYIHRIG RTGRAGLTGH AISFVCPSDE KMLEEIEALI ERKLPRIVVP GYEQGTALPA RYRDSVEVAP NKKRVERRKG KPAGRKEQTR RTKSTSDKSS YSSRRSKR
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