Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3504 |
Symbol | |
ID | 6117836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4272118 |
End bp | 4274058 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635055 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001761863 |
Protein GI | 170727837 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.596547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTC TTCTAATGAC CCCCCCTATG ACTCAGCTGA ATACGCCCTA CCCGGCAACA GCGTATTTAA CGGGCTTTTT ACGCTCCCAA GGCATAGATG CGGTTCAACG AGACCCTGCA ATTGAGCTTT TCCTAGAGAT GATGACAGCG CCGGCACTGG AGATTATTCG TCAACATGTT GAAGAAAATT TCGAGCACTT TGAAGATGAT GAGTTGCCTG ATGCCGTCTT TAACTTTTTA GCTGAATTTG ACCGTTATCA TCAAACCGTC GAAAGTGCGA TTCGCTTTTT ACAGGGCAAA GATCCCAGCC TAGCAATGCG TATTAACTCA CGTCGATTTT TGCCTGAAGG CCCCGCATTT GACACCATTG CCCAGATGGA AGCGGTATCG GGTGATGTAC TGCAAGCCGC CTTTGGTAAC CTAGGCGTAC AAGACAAAGC CAAATATCTA GCCACCCTGT TTATTAATGA TCTCTCCAGC GTTATTACTC AGGGAGTTGA TCCCTATTTT GAAGTGAGCC GTTATGGCGA GCAACTAGCG GCAGCAAACC CAAGCTTTGA TAATCTTTAC GAGACCTTGA TAGGTGAGCC AAGTTTCAGC TCGGAGATTT TAGAGCAGCT GGTTGAGCAG TATCTGGAAG AGACACAGCC TAGTGTCGTT GCCTTAACCG TGCCTTTTCC CGGCAATATG CTAGGCGCCC TGCGAATTGC GCAGACCTGT AAGGCTATCA ACCCTGAGCT GCCTATTGTT ATGGGCGGTG GGTTTATTAA TACCGAGCTG CGGGCGCTGA AAGATCCCCG TGTGTTTGAG TTTGTCGATT TTATCTGCCT AGACGACGGC GAACGTCCCT TTTTGACGCT ACTTGAGTAC TTTCAAGGAC AGCGTGAAGT CGATGATTTG GTGCGCACCT ATTTCCTTGC TGAAGATGAA AATGGTGAGG CTTACGTACA CTTCAATGAA AATTCAGCGC TGCATGATAT TCCACAAAGT GATGTAGGCG CGCCGGTTTA CGATGGCCTG CCATTAGATG AATACCTATC TTTGTGTGAA ATGCTCAACC CGATGCACCG TATATGGAGC GATGGACGCT GGAATAAACT CACCATAGCC CATGGCTGTT ACTGGCGTAA ATGCAGCTTT TGCGATGTCA GCCTAGATTA TATCGATCGT TTCGACGCCG CTGGCGCCGA TGTATTGGTG GATAGAATCG AGCAACTCAT CGAAGAAACT GGCGAGACAG GTTTCCATTT TGTTGATGAG GCTCTACCGC CAAAGCTTCT ATTTACCCTC GCAAAACGTC TCATTGAGCG CAATGTTGTG ATCAGCTGGT GGGGCAATAT CCGTTTTGAA CGAACCTTCA GTCAAGCTCG CTGCCAATTA CTGGCAGATT CCGGTTGCAT CGCTGTAAGT GGTGGCCTTG AGGTCGCTTC AGATCGCCTA TTAAAACTGA TGAAAAAAGG TGTCAGTGTT GAGCGAGTCG CCCAAGTCAC TAAATCCTTC AGTGACGCAG GTATATTAGT TCACGCCTAC TTGATGTATG GCTTTCCAAC ACAAACCGAG CAGGAGACTG TCGATTCACT GGAGATGGTG CGTCAGATGA TGAAGCAAGG TTGTTTCCAA TCGGCCTACT GGCACCGTTT TGTGGCCACG GTTCACAGTC CTATAGGCAT GAATCCAGAG CAATTTGGCA TTACGCTTAT CGATCGCCCA GAGATCCTAT TTGCAGAAAA CGATGTGGAC TTTATCGATC CAACAGATAC AGATCATGAG ATGCTTGGCG AGGGGCTACG TAAAGCCATC TACAACTATA TGCACGGCAT AGGCTTTGAG CAGCCGATGA GTTTCTGGTT TAACCAGAGT GTTGCTCCCA CTGGGATGAA AAAAGATCTC ATCTCAAAGG CGATTAACAA CCTCATAGCC AGTAATAAAG AGTACCAATA G
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Protein sequence | MTVLLMTPPM TQLNTPYPAT AYLTGFLRSQ GIDAVQRDPA IELFLEMMTA PALEIIRQHV EENFEHFEDD ELPDAVFNFL AEFDRYHQTV ESAIRFLQGK DPSLAMRINS RRFLPEGPAF DTIAQMEAVS GDVLQAAFGN LGVQDKAKYL ATLFINDLSS VITQGVDPYF EVSRYGEQLA AANPSFDNLY ETLIGEPSFS SEILEQLVEQ YLEETQPSVV ALTVPFPGNM LGALRIAQTC KAINPELPIV MGGGFINTEL RALKDPRVFE FVDFICLDDG ERPFLTLLEY FQGQREVDDL VRTYFLAEDE NGEAYVHFNE NSALHDIPQS DVGAPVYDGL PLDEYLSLCE MLNPMHRIWS DGRWNKLTIA HGCYWRKCSF CDVSLDYIDR FDAAGADVLV DRIEQLIEET GETGFHFVDE ALPPKLLFTL AKRLIERNVV ISWWGNIRFE RTFSQARCQL LADSGCIAVS GGLEVASDRL LKLMKKGVSV ERVAQVTKSF SDAGILVHAY LMYGFPTQTE QETVDSLEMV RQMMKQGCFQ SAYWHRFVAT VHSPIGMNPE QFGITLIDRP EILFAENDVD FIDPTDTDHE MLGEGLRKAI YNYMHGIGFE QPMSFWFNQS VAPTGMKKDL ISKAINNLIA SNKEYQ
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