Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3465 |
Symbol | |
ID | 6117797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4238327 |
End bp | 4241158 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635018 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001761826 |
Protein GI | 170727800 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000288116 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGAAGA CCTTGAAGTC ATTACCCATC GCATCTTTAT TGCTTGCTTC GGCAAGTTTA GTCTCAGCTG GCTGTTATGC TGCTGCGTCA TCTCCATCAA ACCATAACCC AATGACAACT AACGATATCA TGAAATTTGA ATCGTTAAAG AAACCTGTTA TTTCTGCAAA TGGTGCGGTA CTCGCTGTCG AGGTCGCACC AGATAGGGGA GACAGTCATG GTTTAGTTCA GATGTTGGCC TCACCTAAGA AGTTTACCCT TGATGGCGCC TCTAAGCCTC AAGTTAGCCG TGATGGCCGT TTTGCTGCCT TTGTTGTTAA AACTTCGTTA CTTGAAAAGG CGACAGCGTC AGAGAAGGAG AGAAAAAAGC TCAAGTCAGG CATGGTGTTA CTTGATACTG AAACCGGCAA GGAGACTCGC TTTGAACGTG TTAAGGAGTT TAAGTTTAAT GAGTCAGGGA CACATCTTGC TGTTTGGTTT GAGGCGAAAG AGAAAGATAA GAGCACTAAA GATAAATCTG AACCAGAGTC TGGTAAGAAA GAGAATAAAG CTAAGGTTGA TAAATTTGAT AAAGGGAGTG AATTCAGGCT AATAGCACTA GATAGTGGCG CAAGTCAGAA TATCGCCAAT GTCACTCGTT TCTATTTTGA TAAACTTGGT AAGCACCTTG TTTTAGCGAG TAACAATATA GAAGCTAAGA AACATCAATT AGTATTAGTC TCATTATCAA ATAATAAAAG AGAGGTTGTT CGCCAGTTCA ACAATCAGCA GATTGGTGAA GTCTCCTTAA GTGAAGATGG CAAGTATATC GCCTTTACCC ATGGGGATAG TGAGCAAGCA CCTTTTGGTC GTGAGTATCG ACTTTCGCTA TTGGATATCG CCAGTGGCGA AGTGAAAGCG GCCCCCGTTT CGAAAGAGTG GAAGCTTAAT CGTTACAGCG AGCTTAGATT CTCACAGGAC AGTGAACGTC TCTTTTTTGG CCGCGTCCCT CAGGTGAGTC AACAGTTAGC ATTGAGTAGA ATTCTTAAGC AGGAAGATCT ATTTAATGAA AAGATCATTA CCGACCAGCG GAAGCTTAGA GTTTGGCACG GTGATGATGC CCGCATTAAG CCTAATGAAA TTGAGCAGTA CAAGAAAGAG ATAAAGCGTA CCTACCTTGC TGTTCTGCAC CTGAAAGGGA ATAACTTAGT GCAGCTTGCC GATACTCAGG TACCTGATGT ATCACTACAG GAGCAGTCAC GGTATGTGCT GGGGAGTTCG GATATTCCCT ATCGTAAGAT GATCACTTGG GCTGGCTTTT ATCGTGACTT CTACCTTATT GACCTTAATA CTGGTCATAA AACTTCTATT CTCATTCAGC AGCCAAGTAA ACAGAAGCCC AAGCTATCTC CAAATGAGCG CTTTGCTGTT TATTATCAGC AGGGTGACGT TTACCTGTAT CAAATTTCTC AGGCACGTCG TCATAATCTG ACTAAAGGCT TAAAGGTGCC CTTTGCCGAC GAAGATCATG ATTACCCATC CAATGCGCCA GGTTATGGCT TTGGTCCTTG GTTGGAAAAT GATGCAGGTC TACTTATTTA CGATAAGTAC GATATTTGGC AGATGAATAC CGCATCCTTC GAAGGCTTTA AGTTGACAGG TGGTAAAGGC CGCAAGCAGG GGATCCAGTA TCGCGTGACT GGCTTGGTTG ATGATGAGAA TACCCCCGAT GTACTAAAGG CTAACCAAAG CCTCCTGTTG CATGGTTATA ACGAAAAAAG TAAAGGTGAC GGCTACTACA AGGCTAAGTT AGGCACTTCG GGTGTGACCA CCTTGATGGA AGGGGATTAT AAGCTAACAA CATTAGCGCG CAGCCAAGAT GCAGAGACAA TTATCTTCTC GAAAGAGCGT TACGATCTCT TCCCTGATCT CTACAGTGCT GAGTATTTAG CACCGCAAAA GGCGAAGCGC CAAACGGATC TGGATGCTCA AAAACAGCAG TTTAACTGGA GTCAATCTGA GCTGGTACAC TGGACAAATG GCGATGGAAA GCCTCTTGAT GGCGTGCTTA TTAAACCGAC TAACTATGTC GAAGGGCAAA AGTACCCAGT GCTTGTGTAC TTCTATCGCT TTATGAGTGA CAGACTCAAC GCCTTTCCTC AGATGAAGCT CAACCACAGA CCAAACTTTG CTTGGTATGC AGATAATGGC TATGCCATTT TCCTACCGGA TATCCGTTTT GAAGTGGGAT ACCCAGGCGA AAGTTCAGTT CAGGCGCTCA CCTCTGGAGT ACAGAAAATC ATTGAGATGG GAGTTGGCGA TCCTGATGCC ATTGGTATTC AAGGTCACTC ATGGGGAGGT TATCAAACGG CCTTTGCTGT AACCCAGACT CATATCTTTA AGGCTGCAGT GACTGGTGCG CCAGTATCAA ATATGACCAG TGCTTATAGT GGCATAAGGC ATGGTAGCGG CTTAGCTCGC CAGTTCCAGT ATGAAACGGG GCAGAGTCGT ATTGGTGAGA GCTTGTTTAA GTCACCGCAG AAGTATATCG AGAACTCTCC CATCTTTTAT GTTGAGCGTA TCAAGACACC TATGATGATC ATGTTTGGTG ATAAAGATGA CGCGGTGCCG TGGGAGCAGG GCGTAGAGCT TTATCTTGCC ATGCGCCGTG CGGGGAAAGA TGTGGTATTT TTGCAATACG AGAATGAGCC ACATCATCTG AAGAAATACC CCAATAAGCT TGATTACAGC ATCCGTATGA TGGAGTATTT TGACCACTAC CTTAAGGGAA AACCCGCACC AAAGTGGTTG ACTCAAGGTG AGGCATATAC TGAATATAAG AAAGCGGATT AA
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Protein sequence | MRKTLKSLPI ASLLLASASL VSAGCYAAAS SPSNHNPMTT NDIMKFESLK KPVISANGAV LAVEVAPDRG DSHGLVQMLA SPKKFTLDGA SKPQVSRDGR FAAFVVKTSL LEKATASEKE RKKLKSGMVL LDTETGKETR FERVKEFKFN ESGTHLAVWF EAKEKDKSTK DKSEPESGKK ENKAKVDKFD KGSEFRLIAL DSGASQNIAN VTRFYFDKLG KHLVLASNNI EAKKHQLVLV SLSNNKREVV RQFNNQQIGE VSLSEDGKYI AFTHGDSEQA PFGREYRLSL LDIASGEVKA APVSKEWKLN RYSELRFSQD SERLFFGRVP QVSQQLALSR ILKQEDLFNE KIITDQRKLR VWHGDDARIK PNEIEQYKKE IKRTYLAVLH LKGNNLVQLA DTQVPDVSLQ EQSRYVLGSS DIPYRKMITW AGFYRDFYLI DLNTGHKTSI LIQQPSKQKP KLSPNERFAV YYQQGDVYLY QISQARRHNL TKGLKVPFAD EDHDYPSNAP GYGFGPWLEN DAGLLIYDKY DIWQMNTASF EGFKLTGGKG RKQGIQYRVT GLVDDENTPD VLKANQSLLL HGYNEKSKGD GYYKAKLGTS GVTTLMEGDY KLTTLARSQD AETIIFSKER YDLFPDLYSA EYLAPQKAKR QTDLDAQKQQ FNWSQSELVH WTNGDGKPLD GVLIKPTNYV EGQKYPVLVY FYRFMSDRLN AFPQMKLNHR PNFAWYADNG YAIFLPDIRF EVGYPGESSV QALTSGVQKI IEMGVGDPDA IGIQGHSWGG YQTAFAVTQT HIFKAAVTGA PVSNMTSAYS GIRHGSGLAR QFQYETGQSR IGESLFKSPQ KYIENSPIFY VERIKTPMMI MFGDKDDAVP WEQGVELYLA MRRAGKDVVF LQYENEPHHL KKYPNKLDYS IRMMEYFDHY LKGKPAPKWL TQGEAYTEYK KAD
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