| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3452 |
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| Symbol | |
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| ID | 6117784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4223113 |
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| End bp | 4223802 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635007 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001761815 |
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| Protein GI | 170727789 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00686704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000158375 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTGCTA GGATATTAAT TGTTGAAGAT GAGTTGGCGA TTAGAGAGAT GCTAACTTTT
GTATTGGAAC AGCATGGTTT TGTGACTTCA GCTGCTGAAG ATTTTGATTC CGCCTTAGAC
TTGCTAACTG AGCCATACCC AGATCTTGTT TTATTAGATT GGATGTTTCC TGGTGGAAGC
GGTATTCAAT TGGCTAAGCG GATGCGTCAG GATGAGTTTA CCCGCCAGAT CCCAATTATC
ATGTTAACTG CTCGCGGTGA AGAGGAGGAC AAGGTACGCG GTCTTGAAGT GGGTGCTGAT
GATTATATGA CTAAGCCCTT CTCTCCTAAA GAGCTGGTGG CAAGAATTAA AGCGGTAATA
CGTCGCAGTT CACCGACAAG TCTTGAGGAG CCTATTGATG TTCAGGGCTT GATGTTAGAT
CCCATTAGCC ACCGAGTGAC AGTGGGTGAG CAGGTGTTAG AGATGGGGCC AACCGAGTTT
AGATTACTGC ATTTTTTTAT GACTCACCCA GAGCGGGTTT ATAGTCGTGA GCAGCTACTC
GATAATGTAT GGGGCACCAA TGTGTATGTT GAAGATAGAA CGGTTGATGT ACATATTAGG
CGCTTACGAA AGGCGATTGA ACCCTCTAAC CATGACCGTC TTATTCAAAC GGTGCGTGGC
GCAGGTTATC GTTTCTCCAC TCGTTTATAA
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| Protein sequence | MTARILIVED ELAIREMLTF VLEQHGFVTS AAEDFDSALD LLTEPYPDLV LLDWMFPGGS
GIQLAKRMRQ DEFTRQIPII MLTARGEEED KVRGLEVGAD DYMTKPFSPK ELVARIKAVI
RRSSPTSLEE PIDVQGLMLD PISHRVTVGE QVLEMGPTEF RLLHFFMTHP ERVYSREQLL
DNVWGTNVYV EDRTVDVHIR RLRKAIEPSN HDRLIQTVRG AGYRFSTRL
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