| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3451 |
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| Symbol | |
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| ID | 6117783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4221718 |
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| End bp | 4223013 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635006 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001761814 |
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| Protein GI | 170727788 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000711716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000471047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTGATT CGTATTCGGG TTATCGGCTG CTCTCTCGGT TAATAACCTA CTTAGTACTC
TGCTTTATCT TAGGTCTGCT TATCGGTGAG ATCGTTTGGG TACTTCTTTT AGGAACTGTT
GTCCTACTTT TTTGGCATTA TCGCCAACTT TCAAGATTAA ATTTTTGGTT ATGGCGTGAT
AGACGTCTTA CTCCTCCAAA CGGAAGGGGG AGCTGGGAGG GAGTGTTTAA CGGCATCTAT
CGACTTCAGG GCAAAAACCG TAAACGAGTC TCGCAGTTAG CGTTTCTACT TGGCCGTTTT
CGTCAAGGAG CTGAGGCGCT GCCCGATGCT GCCGTTGTGC TCGATGCTGA GCACAATATC
GTTTGGTGTA ATAAGTTAGC GCAGGTACTG CTTGGCTTAG TATGGCCGCT GGATAGTGGA
CAGAGAATTG ATAATCTTCT GCGTCACCCC GATTTCTCCA ATTATTTGAA AAAGGGGAGT
TATCAGGAGC CGTTGGAGCT TGCCTCTCCT CACTCCGATA GCCGTATTCT TGAGATACGT
ATTATGGGAT ATGGTACAGG TCAGTTCTTA TTGATCGCAC GAGATATTAC GCGGGTAAGG
CAGTTAGAGA GTATGCGTAA AGATTTTGTC GCCAATGTGT CACATGAGCT TAAAACGCCG
CTCACTGTAT TGCAGGGGTA TCTTGAGATG ATGCAGGAGA TGGCAGAGCC TGGTTCGCCT
AATATTAAAG CGATGGATCA GATGCAGCAG CAGACCAATA GGATGCGCTC TATGGTTGAG
CAGTTGCTGG TACTGTCACG TATTGAAGAC TCAACTGAAA TTAATCTTGA GATGACAATC
AATATGTCTC ATATGATGGA TGTGTTGAGA GAGGAAGCGA TGGCCCTGTC TCAAGATGAG
CATGAGTTGG AGTTTCATTG TGAAGCAAGC GATCTTTATG GCAATGAGCT TGAGCTGCGT
AGTGCCTGCT CTAATCTAAT CTCTAATGCG ATTCGTTATA CCCAGCCCGG TGGTAAAGTA
AGTGTTCGCT GGAAGAGTGT TGCTTCAGGA GCTGTATTTA GCGTCACCGA TACCGGAGAT
GGCATTGCTC CACAGCATAT AGGTCGATTG ACTGAACGTT TCTATCGAGT AGACAGTGCT
CGTACCCGAC AAAAGGGGGG AACAGGCTTA GGCTTAGCGA TTACTAAACA TGCCCTTAGC
CATCATCAAA GTGAATTGAT GATAAGCAGT GAATTAGGTA AGGGAAGTAC TTTTAGTTTT
CTTATCCCCA CTAGCTTAAT GGACTATAAA GAGTAA
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| Protein sequence | MFDSYSGYRL LSRLITYLVL CFILGLLIGE IVWVLLLGTV VLLFWHYRQL SRLNFWLWRD
RRLTPPNGRG SWEGVFNGIY RLQGKNRKRV SQLAFLLGRF RQGAEALPDA AVVLDAEHNI
VWCNKLAQVL LGLVWPLDSG QRIDNLLRHP DFSNYLKKGS YQEPLELASP HSDSRILEIR
IMGYGTGQFL LIARDITRVR QLESMRKDFV ANVSHELKTP LTVLQGYLEM MQEMAEPGSP
NIKAMDQMQQ QTNRMRSMVE QLLVLSRIED STEINLEMTI NMSHMMDVLR EEAMALSQDE
HELEFHCEAS DLYGNELELR SACSNLISNA IRYTQPGGKV SVRWKSVASG AVFSVTDTGD
GIAPQHIGRL TERFYRVDSA RTRQKGGTGL GLAITKHALS HHQSELMISS ELGKGSTFSF
LIPTSLMDYK E
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