| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3450 |
|---|
| Symbol | |
|---|
| ID | 6117782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4220543 |
|---|
| End bp | 4221514 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641635005 |
|---|
| Product | phosphate binding protein |
|---|
| Protein accession | YP_001761813 |
|---|
| Protein GI | 170727787 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00138297 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000178512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA AACAACTTGT CGGTGCAGTG AGTTTAACTG CCGCTAGTGT ATTTTCTGCA
ACCTCTATGG CTGCTATCGA TCAGTCACTG CCTGTTTATG AAAAATCAAG TGGCGTATCG
GGTAACCTCT CATCTGTAGG TTCAGATACT CTGGCTAATA TGATGACACT TTGGGCAGAA
GAGTTTAAAG AGATGTACCC TAATGTGAAC ATCCAAATTC AGGCTGCTGG TTCTTCTACT
GCGCCACCAG CTTTGACTGA AGGAACTTCA CAGTTTGGAC CTATGAGCCG TAAGATGAAG
CCAAACGAAA TGGAAGCATT TGAAAAGCAT TACGGTTACC AGCCTACAGC GATTCGTGTT
GCTATCGATG CACTCGCGGT ATTTGTTCAT AAAGATAACC CTATTGAAGG TTTGAGCATC
GAGCAGATCG ATGACATCTT CTCTGCAACA CACAAGTGCG GTGGAAGTGA TGTTAAGCGT
TGGGGCGATG TGGGCCTAAC AGGTAGTTGG TCTGCGAAAG ATGTTCAGCT TTATGGTCGT
AACTCAGTAT CTGGCACTTA CGGCTACTTT AAGAAGAAAG CCCTATGTAA AGGTGACTTT
AAAGCGAATG TAAATGAGCA ACCAGGTTCA GCGTCAGTTG TGCAGTCTGT GTCTCAATCA
CTGAATGCTA TCGGTTACTC AGGTATCGGT TATAAGACTG CAGGGGTGAA AGCCGTTGCT
ATCTCTAAGA AAGGCACTAA GTACATCGAA GCTACTGCAG CCAACGCTGC AAGCGGTACT
TACCCGCTAT CACGTTACCT ATATGTTTAC GTGAACAAGC ATCCAAATAA AGATTTAGCG
CCGATGGATC GTGAGTTTCT TAAGTTTGCG CTCTCTAAGC AAGGTCAGCA GATTGTAGAG
AAAGATGGTT ATGTACCACT TCCTCGTAGT GTGACAGCGA AAGATTTAGC TAAAGCTGGT
ATTCGTCTTT AA
|
|---|
| Protein sequence | MKLKQLVGAV SLTAASVFSA TSMAAIDQSL PVYEKSSGVS GNLSSVGSDT LANMMTLWAE
EFKEMYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEMEAFEKH YGYQPTAIRV
AIDALAVFVH KDNPIEGLSI EQIDDIFSAT HKCGGSDVKR WGDVGLTGSW SAKDVQLYGR
NSVSGTYGYF KKKALCKGDF KANVNEQPGS ASVVQSVSQS LNAIGYSGIG YKTAGVKAVA
ISKKGTKYIE ATAANAASGT YPLSRYLYVY VNKHPNKDLA PMDREFLKFA LSKQGQQIVE
KDGYVPLPRS VTAKDLAKAG IRL
|
|---|
| |