Gene Swoo_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3350 
Symboleno 
ID6117682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4104007 
End bp4105302 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content46% 
IMG OID641634906 
Productphosphopyruvate hydratase 
Protein accessionYP_001761714 
Protein GI170727688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000582829 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000028856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAAA TTATTAATGT CATTGGTCGT GAGATCATGG ATTCACGTGG TAACCCAACT 
GTAGAAGCTG AAGTTCACTT AGAAGGTGGC TTTAACGGTA TGGCAGCTGC ACCGTCAGGT
GCATCTACTG GTAGCCGTGA AGCATTAGAG CTACGTGATG GTGACAAAGC TCGCTACTTG
GGTAAAGGTG TATTGACTGC TGTTGCTAAC ATCAATGGCC CAATCCGTGA TGCCTTAATG
GGTAAAGATG CAACGGCTCA AGCTGAGCTT GATCAGTTGA TGATTGACCT TGATGGTACA
GAGAACAAAG ATAAGCTAGG CGCTAACGCG ATCCTTGCGG TTTCTCTTGC TGCGGCTAAA
GCTGCTGCTG CATTTAAGGG TATGCCTTTA TATGCACATA TCGCTGAGCT AAATGGAACT
CCTGGTCAGT TCTCTATGCC TGTCCCTATG ATGAATATCC TAAATGGTGG CGAGCATGCT
GATAACAACG TTGATATCCA AGAGTTTATG GTACAACCTG TTGGTGCTAA GACGTTCCGT
GAAGCTCTTC GCGTTGGCGC AGAGATCTTC CACAGCCTGA AGAAAGTTCT TCAAGAGAAA
GGTTTGAGTA CTTCAGTGGG TGACGAAGGT GGTTTTGCAC CTAACCTAGC GTCAAATGCT
GATGCACTTG CCATGATCAA GGTTGCTGTA GAGAAAGCGG GTTACAAGCT AGGTGAAGAT
GTGACTCTTG CCCTTGATTG TGCCGCTTCT GAGTTCTACA AAGATGGTCA GTATGACCTA
ACTGGTGAAG GCAAAGTCTT CTCTGCAAAT GGTTTCTCAG ATTTTCTTAA GTCATTGACT
GAAGAGTATC CAATCGCTTC AATCGAAGAT GGTTTGGATG AATCAGATTG GGAAGGTTGG
GCTTACCAGA CTCAAATCAT GGGTGACAAG ATCCAACTTG TCGGTGACGA TCTATTCGTG
ACTAACACTA AGATCTTAAA GCGCGGTATC GACAACAACA TCGCTAACTC AATCTTGATC
AAGTTTAACC AAATTGGTTC TTTGACTGAG ACGCTTGCAG CGATTCGTAT GGCTAAAGAA
GCGGGTTATA CCGTGGTTAT CTCTCACCGT AGCGGTGAAA CTGAAGATGC AACCATTGCT
GATCTTGCTG TTGCTACTTC AGCTGGTCAA ATTAAGACGG GCTCACTGTG CCGTTCTGAT
CGCGTAGCTA AGTACAACCA ACTGCTTCGT ATCGAAGAGC AGCTAGGTGA GAAAGCGCCG
TACCGTGGTC GTAGTGAAAT TAAAGGCCAA GCATAA
 
Protein sequence
MAKIINVIGR EIMDSRGNPT VEAEVHLEGG FNGMAAAPSG ASTGSREALE LRDGDKARYL 
GKGVLTAVAN INGPIRDALM GKDATAQAEL DQLMIDLDGT ENKDKLGANA ILAVSLAAAK
AAAAFKGMPL YAHIAELNGT PGQFSMPVPM MNILNGGEHA DNNVDIQEFM VQPVGAKTFR
EALRVGAEIF HSLKKVLQEK GLSTSVGDEG GFAPNLASNA DALAMIKVAV EKAGYKLGED
VTLALDCAAS EFYKDGQYDL TGEGKVFSAN GFSDFLKSLT EEYPIASIED GLDESDWEGW
AYQTQIMGDK IQLVGDDLFV TNTKILKRGI DNNIANSILI KFNQIGSLTE TLAAIRMAKE
AGYTVVISHR SGETEDATIA DLAVATSAGQ IKTGSLCRSD RVAKYNQLLR IEEQLGEKAP
YRGRSEIKGQ A