| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3326 |
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| Symbol | |
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| ID | 6117647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4073478 |
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| End bp | 4075106 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634871 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_001761690 |
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| Protein GI | 170727664 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0015659 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACGA AACTAGAGAA AAATATATTG AACTCTTTCA ATGAAGTAAT TGAGCATCTC
TCGAACTCTG AGGGGCGTAA TGCACTACAG GGAATGCAAC GTGGTATTGA GCGTGAAGCA
TTGAGGATCA ATGGCTCTGG AGAGCTTGCG ACCGACCGTC ATCCACAAGC GTTAGGCTCT
GCGTTAACTC ATTCGCGGAT CACAACCGAT TATAGTGAGT CACTGTTAGA GTTTATCACT
CCTGTTTATA AGGATATCGA TAACTTACTA CAAGATCTGA CTTACACTCA TGCTTTTACA
GTTCAAAATC TTGATAACCA AAGACTTTGG CCAGTAAGCA TGCCCTGCTA TGTTGGTGAT
GTAAAAGATA TTCCAATCGC CAATTATGGG ATCTCAAACC CAGGCATGAT GAAGAGTTTG
TATCGAAAAG GACTAACCTA TCGATATGGT GCTCAGATGC AGATAATTTC CGGGGTACAT
TTTAACTTCT CTGTCTCAAA TGAGCTTTGG AACAACTTGT ATGCCTACTC AGGCAGCTCG
CTCACGAAAA GTGATTTTAT CTCGGAGTCC TATCTTGGCT TGATCCGTAA CTATCGCCGT
ATGGTGTGGG TATTGCCCTA TCTATTTGGC GCATCTCCAG CACTGTGTAG CTCCTTTATC
AAACAGCAAG AGACAGATAT ACCGTTTGAG AAGATGGGCA AAGGTACCCT GTATCTTCCC
TATGCGACCT CACTGCGTAT GAGTGATCTT GGCTATACCA ACAAGGAGCA GGAGCAGCTT
AATATCAGCT ATGACTCGCT GGATAAATAC TTGGCGGGTA TGAAAGTAGC CATAGGTAAG
TCCTCGAAAA ACTTTGAAGA GATTGGGGTG AAAGTTGATG GTGAGTATCG TCAGTTAAAT
GCCAATGTAC TACAGATTGA GAACGAATTT TACTCACCTA TTCGTGCTAA ACGAGTCACA
GAAAATGGTG AGAAGCCTTC AGAAGCGTTA GCAAGAGCGG GGATCGAATA TATTGAAGTT
AGAGCCTTGG ATGTTAATCC ATATAGCCCT ATCGGTATTG AGGGATCCCA AGTAAGGTTT
TTAGATCTAT TTTTACTTCA CTGCCTGTTA AATACAGCGC CTGCGAGTGA TGCGGCTCAA
GAGGCCGAGA TCTCAAGTAA CTTAAGCCGA GTGATTTTAG AGGGACGTAA GCCAGGATTA
GAGCTGAGCA GAAACGGCGA ATCAATCACG TTATCGGCAT GGATGAATCA GCTATTTGAT
GATCTTGAGC GTTTATCTGT ACTGCTTGAC GATGGCAGTG ATGGCGCTTA CCACCAAGCC
TTGATTCGAT GGCGAGCGGC GGTAGATGAT CCTGAACGTT CAATTTCTGG CTTAATTATG
AAAGAGCTTA AATCGGCTCA AACAGATCAT GGTTACTGGG TGAAGGCGTT GGCTGAAACC
TACTTTAATA CGTTAAATGA GTATCCATTG CCAGAAAGTG TTGAACAGCA ATATCGACAA
GCTGCTGCTG TATCGATAGA GAAGCAGAGA GTGATGGAGG TTGAAACCAA CCAAAGCTTT
GATGCTTTTC TTGCTGAGTA TTTTGCTGAG CCCTCACCAG AGGTCAAGAC TCAGGTTAGT
AACGCCTGA
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| Protein sequence | MMTKLEKNIL NSFNEVIEHL SNSEGRNALQ GMQRGIEREA LRINGSGELA TDRHPQALGS
ALTHSRITTD YSESLLEFIT PVYKDIDNLL QDLTYTHAFT VQNLDNQRLW PVSMPCYVGD
VKDIPIANYG ISNPGMMKSL YRKGLTYRYG AQMQIISGVH FNFSVSNELW NNLYAYSGSS
LTKSDFISES YLGLIRNYRR MVWVLPYLFG ASPALCSSFI KQQETDIPFE KMGKGTLYLP
YATSLRMSDL GYTNKEQEQL NISYDSLDKY LAGMKVAIGK SSKNFEEIGV KVDGEYRQLN
ANVLQIENEF YSPIRAKRVT ENGEKPSEAL ARAGIEYIEV RALDVNPYSP IGIEGSQVRF
LDLFLLHCLL NTAPASDAAQ EAEISSNLSR VILEGRKPGL ELSRNGESIT LSAWMNQLFD
DLERLSVLLD DGSDGAYHQA LIRWRAAVDD PERSISGLIM KELKSAQTDH GYWVKALAET
YFNTLNEYPL PESVEQQYRQ AAAVSIEKQR VMEVETNQSF DAFLAEYFAE PSPEVKTQVS
NA
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