| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3308 |
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| Symbol | |
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| ID | 6117629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4050010 |
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| End bp | 4051635 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634853 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001761672 |
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| Protein GI | 170727646 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000521327 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGAGA CTTTTTTCCG CACCATGACC TGGCTACATA CTTGGGTCGG CCTACTGGTC
TGCTGGGTAT TGCTATTGGT GTTTTTCGCT GGAACCCTTA GTTACTACCG TTATGAGATC
TCCCTATGGA CTCAACCTGA GCTACATAAA GAGGTCTTTC AAGATTACGA GAAGAGTCAG
ATCAAGGCTC AACTTACACA GGCACAAGCC TATCTTGCCC AACATGCCAG TGATACAAAA
GACTGGCGAA TTAATTTCCC CACGGAGCGT AAGCCTTACC TCAGTTATGG CTGGCAAACA
CAACCAGAGC CAGGTCAGCG CCGCGGGAAG TTTATTGAGC ATATCGTTAA AACCGACGGT
AAAGGGATCA TCACAGATAC TCGCGACTCC CGCGGTGGAC ATTTCTTCTA TCGATTACAT
TTCGATCTAC ACTACATGCC CGCCAACATC GCACGTTGGA TAGTCGGCTT CTGCACCATG
TTTATGCTAC TGGCCTTAAT CAGTGGCATA GTGATCCATA AACGTATCTT TAAAGACTTC
TTTAGTTTCA GACGTAACAA AGGCAGCCGT TCATGGTTAG ATGCTCACAA CGTCAGCTCT
GTATTGGCAC TTCCCTATCA CTTAATGATC ACCTACACAG GTCTTATCAC CTTAATGTTG
ATCTATATGC CCTGGGGCAT ACTGACAGCC TATGATGGAG ATGCTCGCGC TTTTCGTGCA
GAGCTCAAAC CTAGCCGTGT ACAGGTAAAA CCCGCTGATA TACCAGCAGA TATGATACAG
ATAGACACTC TGCTACCTAA GGTGAAAGAT TTTTGGGGAG ATGTTCCACT CAAACAGGTT
GTTATCAGTA ACCTTAATGA CAAGAACAGC AGAATCAGTT TCTATCAAAA TACACAACAG
TCAGTAACAG ATAAACGAGT CCCACTTATT TTCAGTGGCA CTGACGGTAA GCTGCTCAGT
GATACACCTG TCACGCCATC AGCAACTCAT GTCACCCATG ATACCTTGAT GTCTCTACAT
ACAGCGCGGT TTGCCGAACC TGTGCTCAGA GCATTTTTCT TCATCTGCGG CATTATGGGC
TGCGCCATGA TAGCTACCGG CACCCTTTTA TGGGCAATAA AAATACGTCA AAAACAGCAG
AAAAGGATTA AAGATGGCGC CAAAGCGACA CTAGGCTTAC GTTTGGTTGA GGGGTTAAAC
CTAACCTTTA TCGCAGGACT TCCTCTTGCC ACCTGCAGCT TTTTCTACGC TAACCGCATT
TTAGCTAAAA CCATGGAGAA CCGAGCTCAA TGGGAGATAA ATAGCTTCTT TATTGCCCTA
GCACTTGTCG CGCTATTAGC CTGCTTTAAC CGAGGGCAAA CTAGCTGGCG CTTAGTATTA
CGTCTATCAG CAGCAGGCCT CATCGCCATT CCAGTACTTA ACGCATTAAC CTCAAATAGC
CATTTGATAA GTAACATCAC CGGGCAACAG TGGGCGTTAG TTGGGTTCGA TCTTATCTGT
ATGTTATTTG GTGGCGCACT TTGGTTTGCT TCAAACAAGC TTAGGCATAC AACTAACCTC
GCTAAGGTAA ACCGACCAGC TAAACAGGAT TCTCACCTTT CACAAACAGT TAAAGAGGGA
GCATAA
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| Protein sequence | MKETFFRTMT WLHTWVGLLV CWVLLLVFFA GTLSYYRYEI SLWTQPELHK EVFQDYEKSQ
IKAQLTQAQA YLAQHASDTK DWRINFPTER KPYLSYGWQT QPEPGQRRGK FIEHIVKTDG
KGIITDTRDS RGGHFFYRLH FDLHYMPANI ARWIVGFCTM FMLLALISGI VIHKRIFKDF
FSFRRNKGSR SWLDAHNVSS VLALPYHLMI TYTGLITLML IYMPWGILTA YDGDARAFRA
ELKPSRVQVK PADIPADMIQ IDTLLPKVKD FWGDVPLKQV VISNLNDKNS RISFYQNTQQ
SVTDKRVPLI FSGTDGKLLS DTPVTPSATH VTHDTLMSLH TARFAEPVLR AFFFICGIMG
CAMIATGTLL WAIKIRQKQQ KRIKDGAKAT LGLRLVEGLN LTFIAGLPLA TCSFFYANRI
LAKTMENRAQ WEINSFFIAL ALVALLACFN RGQTSWRLVL RLSAAGLIAI PVLNALTSNS
HLISNITGQQ WALVGFDLIC MLFGGALWFA SNKLRHTTNL AKVNRPAKQD SHLSQTVKEG
A
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