Gene Swoo_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3290 
Symbol 
ID6117610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4034070 
End bp4034387 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content39% 
IMG OID641634835 
Producthypothetical protein 
Protein accessionYP_001761655 
Protein GI170727629 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.590792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000251161 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTATG CGAATACAAC AGAAAAACTC CATCAGCTAG AAACAGAGCT AAAGGTTCAT 
GGCTTATGGT CAAGCGTCCC ACCTTCTACT GAGGCTATGG CTAATACATC GCCCTTTAGT
TGCGATGTCA TGCCATTTGA AAACTGGGTC CAATTTATAT TTATTCCTAA AATGGAGCAA
TTAATAAACT CTCAGAATGC ACTTCCTTCA AATATAGCCA TTGCCCCGAT GGCACACCAT
GTTTGGAATC ATCAGCCTGA TTTGCATGGC TTAATTAATA TTTTCGATGA ATTGGATAGA
ATGCTAAGTG AACAATGA
 
Protein sequence
MLYANTTEKL HQLETELKVH GLWSSVPPST EAMANTSPFS CDVMPFENWV QFIFIPKMEQ 
LINSQNALPS NIAIAPMAHH VWNHQPDLHG LINIFDELDR MLSEQ