| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3281 |
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| Symbol | rpsB |
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| ID | 6117600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4023630 |
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| End bp | 4024358 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634825 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001761646 |
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| Protein GI | 170727620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000428583 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000650106 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTACAG TTTCAATGCG CGACATGCTA CAAGCCGGTG TTCACTTCGG TCACCAGACT
CGTTACTGGA ACCCAAAGAT GAAGCCATTC ATCTTCGGTG CTCGTAATGG TGTTCACATC
ATCAACCTAG AGCACACTGT GCCTATGTTC AATGAAGCAC TTGCTTTCAT CAGCAATGTT
GCATCAAAGA AAGGTAAAGT TCTTTTTGTT GGTACTAAGC GTGCTGCAAG CGAAGCTATC
AAAGAGTCTG CTATCTCTTG TGATCAGTAC TACGTTGATC ACCGCTGGTT AGGCGGTATG
TTGACTAACT GGAAAACAGT TCGTCAATCA ATCAAGCGTC TTAAAGATCT TGAGAGCCAG
TCTGTTGACG GTACTTTCGA CAAGCTTACT AAGAAAGAAG CGCTTATGCG TACTCGTGAG
CTTGAGAAGT TAGAAAAATC TCTTGGTGGT ATCAAGAACA TGGGCGGCCT ACCTGACGTT
ATCTTCGTTA TCGGTGCTGA CCATGAGCAT ATCGCTATTA AAGAAGCTAA TAACTTGGGT
ATCCCAGTTG TAGCTGTTGT TGATACTAAC TCTTCTCCAG ACGGTATCAA CTACATCGTT
CCTGGTAACG ATGACGCAAT GCGTTCTATC CGTTTATACA CTGAGTCTGT TGCTGCCGCT
GCTAAAGCTG GCCGTGGTCA AGACCTAGCT GTACAAGCTG AGCAAGACGG TTTCGTCGAA
GCTGAATAA
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| Protein sequence | MTTVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNV
ASKKGKVLFV GTKRAASEAI KESAISCDQY YVDHRWLGGM LTNWKTVRQS IKRLKDLESQ
SVDGTFDKLT KKEALMRTRE LEKLEKSLGG IKNMGGLPDV IFVIGADHEH IAIKEANNLG
IPVVAVVDTN SSPDGINYIV PGNDDAMRSI RLYTESVAAA AKAGRGQDLA VQAEQDGFVE
AE
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