Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3231 |
Symbol | |
ID | 6117550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3959761 |
End bp | 3960243 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634775 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001761596 |
Protein GI | 170727570 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0496837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTAT TGAAAAGTGC ATTACTGTTT ATTTTGTTCG CTGGAAATTT ACAAGCAGCT GAGGTTCTAA ATGTTGCGCC AAATTTCAAT TTAGCCGATC CACAGGGCAA GATGCACACT TTGGCTGAGT ACAAGGGCAA GCCGATGATA ATACACTTCT GGGCGACCTG GTGTCCCTAT TGTAAGAAGC TGCAGCCAGG ACTTGAGTCA TTAAGAAAAG AGTACGCTAA CACTGATCTA CAGATATTAG GGATTAGCTT TAATGAAGAT GAGGGAGCGA TGCCAGCTGA GACTCTTAAA AAGCGTGGTA TAGGTTTTCC AACGCTCATT AATGGTGAGA GTGCAGCCAA AAGTTACGGC GTCCCAGGGA CCCCAACCAC AGTATTTATC AACCGCGGCG GAGAGATAGT TTGGGTTACC AATATTTCAG ATCCTAATGA CCCAAATCTT AACGCCGCCA CTGAGTTTAT TCTCAAAAAT TAG
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Protein sequence | MRLLKSALLF ILFAGNLQAA EVLNVAPNFN LADPQGKMHT LAEYKGKPMI IHFWATWCPY CKKLQPGLES LRKEYANTDL QILGISFNED EGAMPAETLK KRGIGFPTLI NGESAAKSYG VPGTPTTVFI NRGGEIVWVT NISDPNDPNL NAATEFILKN
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