Gene Swoo_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3231 
Symbol 
ID6117550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3959761 
End bp3960243 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID641634775 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001761596 
Protein GI170727570 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0496837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAT TGAAAAGTGC ATTACTGTTT ATTTTGTTCG CTGGAAATTT ACAAGCAGCT 
GAGGTTCTAA ATGTTGCGCC AAATTTCAAT TTAGCCGATC CACAGGGCAA GATGCACACT
TTGGCTGAGT ACAAGGGCAA GCCGATGATA ATACACTTCT GGGCGACCTG GTGTCCCTAT
TGTAAGAAGC TGCAGCCAGG ACTTGAGTCA TTAAGAAAAG AGTACGCTAA CACTGATCTA
CAGATATTAG GGATTAGCTT TAATGAAGAT GAGGGAGCGA TGCCAGCTGA GACTCTTAAA
AAGCGTGGTA TAGGTTTTCC AACGCTCATT AATGGTGAGA GTGCAGCCAA AAGTTACGGC
GTCCCAGGGA CCCCAACCAC AGTATTTATC AACCGCGGCG GAGAGATAGT TTGGGTTACC
AATATTTCAG ATCCTAATGA CCCAAATCTT AACGCCGCCA CTGAGTTTAT TCTCAAAAAT
TAG
 
Protein sequence
MRLLKSALLF ILFAGNLQAA EVLNVAPNFN LADPQGKMHT LAEYKGKPMI IHFWATWCPY 
CKKLQPGLES LRKEYANTDL QILGISFNED EGAMPAETLK KRGIGFPTLI NGESAAKSYG
VPGTPTTVFI NRGGEIVWVT NISDPNDPNL NAATEFILKN