Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3227 |
Symbol | |
ID | 6117546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3956596 |
End bp | 3957486 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641634771 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001761592 |
Protein GI | 170727566 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.461669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0268749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTA ACAAGGTTAG CATTTTTGAG GTGGGTGCCC GTGATGGTCT GCAAAACGAG CTGCCAGTCA CCACCCAAGA TAAAATTGCC TTAGTTGAAG CATTAGGCCG AGCAGGTGTT AAGCGAATAG AAGCCGCCAG CTTTGTATCA CCCAAATGGG TACCACAGAT GGCCGACTCT GGCGATGTTC TGCGCAATAT TAGTCGCCAA GATGGCGTCA CCTACAGCGC GCTCACACCT AACTTGAAGG GGCTGGAACT TGCACTTGAC GCTGGTGCCG ATGAAGTTGC CATTTTTGGC GCCGCCTCCC AGAGCTTTAG TCAGCGTAAT ATCAACTGCT CAATAGAGGA ATCTATTGAG CGCTTCGCCC CTGTAATGGA GCGGGCTATT GCCGCAAATA TCCCTGTCCG AGGATATGTC TCTTGCGTGC TAGGTTGCCC CTATGAAGGT GATATTGCCA TCAGTGAAGT CGCACGAGTG TCTGAGATCC TTTACAAGAT GGGCTGTTAT GAAATATCCC TTGGTGACAC CATAGGTGTT GGCACGCCAG CCAATGCCCG TAGAATGGTT GAAGCGGTCA GCCAGAAAGT ACCCGTTGAT AAGCTGGCAC TGCATTTTCA TGATACCTAC GGCCAAGCAC TCGCAAATAT CTTAGCCTGC TTAGAAACAG GGGTAAGCGT GATCGATTCA TCGGTTGCAG GCCTTGGAGG CTGCCCCTAC GCCAAAGGTG CATCGGGTAA TTTAGCAACT GAGGATCTTG TTTATATGCT CAATGGATTA GGTATCGAAA CAGGCATCGA TCTTCATTTG CTGGCTAAAG CGGGTAATAC AATAAGCCAA GCCTTAGGCA AAAGTACTGG CTCTAAAGTA GCAAGAGCCA TCAGCGGATA A
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Protein sequence | MTPNKVSIFE VGARDGLQNE LPVTTQDKIA LVEALGRAGV KRIEAASFVS PKWVPQMADS GDVLRNISRQ DGVTYSALTP NLKGLELALD AGADEVAIFG AASQSFSQRN INCSIEESIE RFAPVMERAI AANIPVRGYV SCVLGCPYEG DIAISEVARV SEILYKMGCY EISLGDTIGV GTPANARRMV EAVSQKVPVD KLALHFHDTY GQALANILAC LETGVSVIDS SVAGLGGCPY AKGASGNLAT EDLVYMLNGL GIETGIDLHL LAKAGNTISQ ALGKSTGSKV ARAISG
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