Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3212 |
Symbol | |
ID | 6117531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3939712 |
End bp | 3940584 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641634756 |
Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
Protein accession | YP_001761577 |
Protein GI | 170727551 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.230421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000292198 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCTT GGATACTGGC CATAAGGCCT CGCACCTTGC CAGCGGCAAT TGGTCCGCTC TTAGTTGGCA ACATACTAGC GCTGCAGTTA ACCCAATTTA GCCTACTTAT CGCCTGTGTC TCTATGCTAT GTGCTGTGTT GCTGCAGATA GCCGTTAACT TGGCCAATGA CTACTTTGAC TTTAAGAGTG GTGTCGATAC AGAGGAGCGA TTAGGCCCAG TTCGTGTGAC TCAAAGCGGG CTCCTCTCCC CCACTAAAGT GCGTAATGCT ATGTCTCTAT GCCTATTGCT TGCGCTTTTG GTTGGCTCCT ACCTCATTTG GCATGGTGGT TGGCCTATTG CCGTACTGGC TACAGCCGCG ATATTAGGCG CCCTATGTTA TAGCGGTGGT CCCTATCCAT TGGCCTCTCA CGGACTGGGT GAGCTTGCTG CGTTTGTTTT CTTTGGCTTA GTAGCGGTGG TAGGAAGTTA TTATCTACAA GCGGGAGAGA CTAGCATTCA AGCGTGGATT TTAGGAGCGG CGATCGGCTT TCTTAATGCT GCCATCATGT TGGTCAATAA TACCCGGGAC ATGGTCACAG ACACTAAAGC AGGCAAACAG ACATTGGCTG TTCGTCTCGG TTTAGGCCAA GCAAGAGTGC TTTATCAAGC TTTTGTCTAC CTGCCTTTTG CACTTATCAT CGCGGGGTTC TTTCTTGGAT TCCTTCCAGG GTTACCGGTT TTACTAGCGG GACTGTCGCT TATCATCGCC CGTAAACTTA ACACTGACTT TAGTCAGAGC TCTGGAGCTG AACTCAACCC GCTACTGGGA AGAACAGCTA AGCTGACCAT GATATTCAGC GCACTTTTTA GTATTGGCTT GGTATTTGTT TAA
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Protein sequence | MNPWILAIRP RTLPAAIGPL LVGNILALQL TQFSLLIACV SMLCAVLLQI AVNLANDYFD FKSGVDTEER LGPVRVTQSG LLSPTKVRNA MSLCLLLALL VGSYLIWHGG WPIAVLATAA ILGALCYSGG PYPLASHGLG ELAAFVFFGL VAVVGSYYLQ AGETSIQAWI LGAAIGFLNA AIMLVNNTRD MVTDTKAGKQ TLAVRLGLGQ ARVLYQAFVY LPFALIIAGF FLGFLPGLPV LLAGLSLIIA RKLNTDFSQS SGAELNPLLG RTAKLTMIFS ALFSIGLVFV
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