Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3206 |
Symbol | |
ID | 6117525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3934261 |
End bp | 3935028 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641634750 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001761571 |
Protein GI | 170727545 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0196374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000191957 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACACAAG CCACAGCCAT TATCGTGGGC GCAAGCTCCC TTCTGAGTCG TGAAATTATA AAACAACTCT CAGAACAGGG TGTTGAACTT GCCCTGCTTG CGCAAGATCC TGACTCACTT GAGGAGTTTG CAAAAAGCTT GCCTAGCCCA GTGCAGATTT TTCCGCTCAA TATCTCTGAG CCCTCCTCTA TTATCTCGAC CATAGAAAAT GCGTGGCAGG CTGTCGGTGG CGCTCATCTG GTTTTAGTCA ATACTGGACT CAACAGCTAC AGTGCAGACC TTCCATGGTT GCCGGAACAA GATATCATCA CAGTGAATGT TCAGGGCTTT GCCGCTATCT GCAACACCAG CTTTCGTTTA TTTAAAACCC AAGGGTATGG CCAACTTGCC GCCATTAACT CCATAGCAGG CTTACGTGGT GGACCGAGTG TCGCTTACCA TGCCTCTAAA GCCTTCGCGA CCAACTACCT CGAAGGTTTG AGCATGCATG CCCAAAGGTT AAAACTGCCC ATTACAATCA CAGATCTTCA GTTAGGTTTG CTTGATAAAG CTGCCATGCA GCAAAACAGG TTATGGCTGT CACCACCAAA TGAGGTCGCA AGCCAGATAA TTAAGGCGAT GAAAGCGGGA AAGCGTAAGG TTTATGTCAC TAAGCGTTGG CGTTTAGTCG CTTGGCTCAC CAAGCTGCTA CCTGAGTTTG TCTATAACAC TCGCCACTGG CGAACTAAAG CTGAGCGTAA GGCTGCCAAA GCACAAGGGA AAAAATAG
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Protein sequence | MTQATAIIVG ASSLLSREII KQLSEQGVEL ALLAQDPDSL EEFAKSLPSP VQIFPLNISE PSSIISTIEN AWQAVGGAHL VLVNTGLNSY SADLPWLPEQ DIITVNVQGF AAICNTSFRL FKTQGYGQLA AINSIAGLRG GPSVAYHASK AFATNYLEGL SMHAQRLKLP ITITDLQLGL LDKAAMQQNR LWLSPPNEVA SQIIKAMKAG KRKVYVTKRW RLVAWLTKLL PEFVYNTRHW RTKAERKAAK AQGKK
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