Gene Swoo_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3206 
Symbol 
ID6117525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3934261 
End bp3935028 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID641634750 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001761571 
Protein GI170727545 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0196374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000191957 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACACAAG CCACAGCCAT TATCGTGGGC GCAAGCTCCC TTCTGAGTCG TGAAATTATA 
AAACAACTCT CAGAACAGGG TGTTGAACTT GCCCTGCTTG CGCAAGATCC TGACTCACTT
GAGGAGTTTG CAAAAAGCTT GCCTAGCCCA GTGCAGATTT TTCCGCTCAA TATCTCTGAG
CCCTCCTCTA TTATCTCGAC CATAGAAAAT GCGTGGCAGG CTGTCGGTGG CGCTCATCTG
GTTTTAGTCA ATACTGGACT CAACAGCTAC AGTGCAGACC TTCCATGGTT GCCGGAACAA
GATATCATCA CAGTGAATGT TCAGGGCTTT GCCGCTATCT GCAACACCAG CTTTCGTTTA
TTTAAAACCC AAGGGTATGG CCAACTTGCC GCCATTAACT CCATAGCAGG CTTACGTGGT
GGACCGAGTG TCGCTTACCA TGCCTCTAAA GCCTTCGCGA CCAACTACCT CGAAGGTTTG
AGCATGCATG CCCAAAGGTT AAAACTGCCC ATTACAATCA CAGATCTTCA GTTAGGTTTG
CTTGATAAAG CTGCCATGCA GCAAAACAGG TTATGGCTGT CACCACCAAA TGAGGTCGCA
AGCCAGATAA TTAAGGCGAT GAAAGCGGGA AAGCGTAAGG TTTATGTCAC TAAGCGTTGG
CGTTTAGTCG CTTGGCTCAC CAAGCTGCTA CCTGAGTTTG TCTATAACAC TCGCCACTGG
CGAACTAAAG CTGAGCGTAA GGCTGCCAAA GCACAAGGGA AAAAATAG
 
Protein sequence
MTQATAIIVG ASSLLSREII KQLSEQGVEL ALLAQDPDSL EEFAKSLPSP VQIFPLNISE 
PSSIISTIEN AWQAVGGAHL VLVNTGLNSY SADLPWLPEQ DIITVNVQGF AAICNTSFRL
FKTQGYGQLA AINSIAGLRG GPSVAYHASK AFATNYLEGL SMHAQRLKLP ITITDLQLGL
LDKAAMQQNR LWLSPPNEVA SQIIKAMKAG KRKVYVTKRW RLVAWLTKLL PEFVYNTRHW
RTKAERKAAK AQGKK