| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3149 |
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| Symbol | |
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| ID | 6117468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3856305 |
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| End bp | 3857597 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634694 |
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| Product | putative serine transporter |
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| Protein accession | YP_001761515 |
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| Protein GI | 170727489 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTG TAATTAGCAA AACTGAAACC GCCTCGACAC AAATCGAAGT CAAATCAAGC
TGGAGTAAAA GTGATACCCT ATGGGTATTA GGGCTTTATG GAACAGCAGT AGGTGCTGGC
ACTCTTTTTC TTCCCATTAA CGCAGCACAA GGTGGTTTAA TACCACTGAT AATGATGGCC
CTTCTTGCAC TCCCTATGAC CTTCTTCGCC CATCAGGGGA TGACACGATT TGTGTTATCA
GGGTCTAAGC CAGGAGCTGG GATCACAGAG GTGGTTGAGG AGCATTTTGG TGTTGGCATG
GGTAAGGTTA TCACCTTGCT TTACTTCTTT GCAATCTACC CCATTCTATT AGTCTACAGT
GTCGCACTAA CCAACACTGT TGAGAGTTTT CTGCTGCACC AGCTAAATAT CACCCCACCT
AACCGTGCGA CTTTAGCTTT AGTCTTGATC ATAGCCTTGA TTGCAGTGGT GCGCTTAGGA
GAGCAGTTAA TCATCAAGGC GATGAGTGTA TTGGTATTCC CCTTTGTCGC TGTACTTCTG
ATGCTCTCTT TCTATTTAAT TCCTTACTGG AACACGGCAA TCTTTAATAA CATCGTGCCT
GCAGAGGGAG GGATCAGCAC TATCGTCATG GCTCTGTGGC TAATTCTGCC TGTGATGGTC
TTTTCATTTA ATCACTCGCC GGTTATCTCC TCCTTCGCCG TCGATCGCAA AAAAGCACAT
GGTGATAATG CTGAAAAGCA GTGTTCACGA ATTCTAGCTA TGAGCCATAT TCTCATGGTC
GCCACTGTGA TGTTTTTTGT CTTTAGCTGT GTACTAAGCC TCTCTCCTGC AAATTTGGCA
GAAGCAAAGG CACAAAATGT GTCGATATTA ACCTATTTGG CAAATCACTT TAATACACCA
ATTATCGCCT ATGCCGCGCC TATAGTAGCA ATAATAGCTA TCACGAAGTC GTTCTTCGGT
CACTATATTG GTGCCAGTGA AGGTTTTAAT GGCTTAATAA TTAAATCTGC ACGTAGCAGG
AAGAAGGAGA TCAGTTCAGT CACCTTAAAT CGTTTTACGA CTGCCTTTAT GCTGCTAACA
ACCTGGGCTG TAGCCACAAT TAATCCCAAT ATCTTAGGCA TGATCGAAAG CTTAGGCGGT
CCGATTATCG CACTACTACT TTTTATAATG CCTATGTATG CCATCAAAAA AGTACCAGCA
ATGAAGCAGT ATTCAGGTCA ATTAAGTAAT TTTTTCGTCG TTATTATCGG GCTAATTTCG
ATATCGGCAA TCTTCTACTC TCTTGTTCAG TAA
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| Protein sequence | MDTVISKTET ASTQIEVKSS WSKSDTLWVL GLYGTAVGAG TLFLPINAAQ GGLIPLIMMA
LLALPMTFFA HQGMTRFVLS GSKPGAGITE VVEEHFGVGM GKVITLLYFF AIYPILLVYS
VALTNTVESF LLHQLNITPP NRATLALVLI IALIAVVRLG EQLIIKAMSV LVFPFVAVLL
MLSFYLIPYW NTAIFNNIVP AEGGISTIVM ALWLILPVMV FSFNHSPVIS SFAVDRKKAH
GDNAEKQCSR ILAMSHILMV ATVMFFVFSC VLSLSPANLA EAKAQNVSIL TYLANHFNTP
IIAYAAPIVA IIAITKSFFG HYIGASEGFN GLIIKSARSR KKEISSVTLN RFTTAFMLLT
TWAVATINPN ILGMIESLGG PIIALLLFIM PMYAIKKVPA MKQYSGQLSN FFVVIIGLIS
ISAIFYSLVQ
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