| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3134 |
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| Symbol | |
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| ID | 6117453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3843886 |
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| End bp | 3845064 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641634679 |
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| Product | glycerate kinase |
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| Protein accession | YP_001761500 |
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| Protein GI | 170727474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1929] Glycerate kinase |
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| TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00500551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATAG TTATCGCCCC CGATTCATTT AAAGAGAGCT TGAGTGCGAT GGAAGTGGCC
GATGAGATTG AACGCGGCTT TAAGATGGTG TTACCCGATG CAGAGTTCAT CAAGCTCCCT
GTTGCCGATG GTGGTGAAGG CACTGTTCAG TCGATGGTCG ATGCAACTCA AGGCAGCATT
ATCAATCTTG AGGTGACGGG CCCCTTAGGT AACCGCGTAC ACGCACACTA TGGCATTTTG
GGTGACAATG ACGACAACGC AGTCAAAACG GCAGTGATAG AGATGGCATC AGCCTCTGGA
CTGCACCATG TGCCGATACA TTTGCGCGAT CCGCTTATCA CCACAAGTTA CGGCACTGGA
GAGCTCATCT GTAACGCACT CAATCGGGGG ATTAAGCGTA TCTTAATCGG ACTCGGTGGT
AGTGCCACAA ACGATGGCGG AGCAGGAATG GCTCAAGCGC TCGGGGTTCA CCTACTAGAT
AAAAAGGGCA ACCCCTTGCC AGTAGGTGGC GCATCTCTTC AGCAACTTGA ACGCATTGAT
CTTAAAGATA TTCACCCGCT TATCGCGGAG TGTGAATTTG AAGTCGCCTG TGATGTAGAT
AACCCACTCT GTGGCGAAAA AGGGGCCTCT GCTATTTTTG GACCTCAAAA AGGGGCTAGC
CCTGAGGTGG TCTCAATACT GGATGCTGCC CTAACTCGTT ATGCCGATAT CATTGCTCAA
CACCCACTCC CTGACAGGCG TAATATGGCA GGCTCTGGCG CCGCTGGCGG CATGGGCTTA
GGGGTCATGG CTTTTCTAGG GGCTTCACTC AGACCCGGCA TCGATATCGT GATGGAAACC
GTAAAGCTCG ATGAAAAGAT AAAAGGTGCC CAGCTTGTTA TCACAGGTGA AGGAAGATTA
GACAGTCAAA CTTTACACGG AAAAACCCCT ATGGGAGTGA CACGGATCGC AAACGCACTG
CAGATCCCTG TGATAGCTAT CGCAGGATGT GTCAGTGATG ATGCTAATAT CTTACTCAAG
CACGGTATCA GCGCTATCTT CTCTATCACA CCAAGAGCAC TGCCTATTGA GGAGGTGCTC
GCTAGCGCAA AGCATAACCT GTTTACCACT TCGCACAATA TTGCAGCACT TTATGCCCAA
ACAACTTCAA GATGCAGGAT TCAGCATGTC GAGAAGTGA
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| Protein sequence | MKIVIAPDSF KESLSAMEVA DEIERGFKMV LPDAEFIKLP VADGGEGTVQ SMVDATQGSI
INLEVTGPLG NRVHAHYGIL GDNDDNAVKT AVIEMASASG LHHVPIHLRD PLITTSYGTG
ELICNALNRG IKRILIGLGG SATNDGGAGM AQALGVHLLD KKGNPLPVGG ASLQQLERID
LKDIHPLIAE CEFEVACDVD NPLCGEKGAS AIFGPQKGAS PEVVSILDAA LTRYADIIAQ
HPLPDRRNMA GSGAAGGMGL GVMAFLGASL RPGIDIVMET VKLDEKIKGA QLVITGEGRL
DSQTLHGKTP MGVTRIANAL QIPVIAIAGC VSDDANILLK HGISAIFSIT PRALPIEEVL
ASAKHNLFTT SHNIAALYAQ TTSRCRIQHV EK
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