| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3113 |
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| Symbol | clpP |
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| ID | 6117429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3813948 |
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| End bp | 3814559 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634655 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001761479 |
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| Protein GI | 170727453 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000036398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000289383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAAAATG CACCAGAATC AGTACTAAAT GCACTCGTTC CTATGGTGGT TGAACAAACC
GCTAAAGGTG AACGTTCATA CGATATCTAT TCTCGTCTGC TTAAAGAGCG CGTCATCTTC
CTTGTTGGCC AAGTTGAAGA ACATATGGCT AACCTTATCG TAGCTCAGTT ACTGTTTTTG
GAATCTGAGA ATCCAGATCA AGAGATCTCG CTCTATATCA ACTCTCCAGG TGGTTCTGTC
ACTGCAGGTA TGGCTATTTA CGATACGATG CAGTTTATTA AACCAAACGT CAGCACTGTA
TGTATCGGCC AAGCTGCAAG CATGGGGGCA TTCCTGCTTG CCGGTGGTGC GAAGGGAAAA
CGTCACTGTT TACCTAATTC ACGTGTGATG ATCCATCAGC CATTAGGTGG CTTCCAAGGT
CAGGCATCGG ATTTCGCTAT CCATGCGCAA GAGATCTTAG GGATCAAGAA CAAGCTAAAC
AATATTTTGG CAGAGCATAC TGGTCAGCCA TTGGAAGTTA TCGAGCGTGA TACCGATCGT
GATAACTTTA TGAGTGCAGC ACAGGCTGCT GAATATGGTT TAGTTGATTC GGTGTTTGAA
CAACGGGGCT GA
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| Protein sequence | MQNAPESVLN ALVPMVVEQT AKGERSYDIY SRLLKERVIF LVGQVEEHMA NLIVAQLLFL
ESENPDQEIS LYINSPGGSV TAGMAIYDTM QFIKPNVSTV CIGQAASMGA FLLAGGAKGK
RHCLPNSRVM IHQPLGGFQG QASDFAIHAQ EILGIKNKLN NILAEHTGQP LEVIERDTDR
DNFMSAAQAA EYGLVDSVFE QRG
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