| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3106 |
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| Symbol | |
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| ID | 6117422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3804467 |
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| End bp | 3805255 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634648 |
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| Product | ABC transporter related |
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| Protein accession | YP_001761472 |
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| Protein GI | 170727446 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.231583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000353059 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACTC CACTCCTTCA AGTTAATGAG TTAAGTAAGC GTTTTGATAC TGGTTACAGA
AGATTCAAGC GAACCTACAA TCAAGCCCTG CACCCAGTAT CATTTGTCTT AAACAGGGGG
GAAACCTTGG CTGTTGTGGG CGAAGCTGGC TCAGGAAAAA GTACACTGGC GCGTATTCTT
GTGGGTGCAG AGGATAGAAC AACTGGCGAT ATCTTATTTG AAGGTGAAGC CTTAGAGTTA
AGAAACCTCA AGCAGAGATG TAAGTTAATC AGGATGATTT TCCAAGATCC TAACACCTCA
TTAAACCCCA GGTTAACCAT AGGTGAACTG CTTGACGAGC CTCTCAAATT CAACACCAAT
CTTGACGTCA AAGAGCGTAA AGCTCAGGTG ATAGACAGAT TAAAAAAAGT GGGATTGCTG
CCTGAGCATG CCGAGTTTTA TCCTCATATG ATCTCTGAGG GGATGAAACA GCGTGTCGCT
GTTGCCCGGG CTCTCATGCT CAACCCTAAA ATAATCATTG CCGATGAAGC CTTGACTGCG
CTCGACCTTT CGGTACGTTC ACAAATATTG AATTTACTAC TGAAACTCCA AAAAGAGATG
GGACTTTCCT ATATTTTTGT ATCCCATAAC CTAAATATTA TTAAACATTT CAGTGATAAA
ATAATGGTAT TACACAAAGG TGAGATGGTT GAAAAAGCCA CAACAGAGGA TCTGTTTAAT
TCACCACAAC ATGAATACAC ACAAAGACTT ATTCAAGAGC AAGATCTACT TAATCATAAG
CGGGGCTAA
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| Protein sequence | MTTPLLQVNE LSKRFDTGYR RFKRTYNQAL HPVSFVLNRG ETLAVVGEAG SGKSTLARIL
VGAEDRTTGD ILFEGEALEL RNLKQRCKLI RMIFQDPNTS LNPRLTIGEL LDEPLKFNTN
LDVKERKAQV IDRLKKVGLL PEHAEFYPHM ISEGMKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQKEM GLSYIFVSHN LNIIKHFSDK IMVLHKGEMV EKATTEDLFN
SPQHEYTQRL IQEQDLLNHK RG
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