| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3105 |
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| Symbol | |
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| ID | 6117421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3803479 |
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| End bp | 3804492 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634647 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001761471 |
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| Protein GI | 170727445 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000250169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTTAC TCGATATAAG AAACTTAACC ATAGAGCTCG ACACCCCTCA CGGCCGTGTT
AAAGCTCTTG AACGAGTCAG CCTAACGGTT AACCCAGCAG AGGTACATGG ACTCGTTGGT
GAATCAGGCT CTGGCCGTAG CCTACTGGCT CGCGCAATTT TAGGGATCCC TGGACATAAC
TGGAGCATTA CTGCCGACCG CATGATGTGG GATGGGCGTA ACTTGCTGGA GATGAGCCCA
AAACAGCGAC GTAACTTAAT GGGAAGCGAG ATATCCATGA TATTTCAAGA CCCATCGAGT
AGCCTAGATC CTGTGATCAG TATCGGCGAT CAGCTCATTG AAGCGATGCC ATCCCATAAA
AACATCCCCT TTTGGCGCAG AGGCAAAAAG AGAAAACAGA CAGCCGAGAA GTGGCTGCAC
AAGGTCGGCA TAAAAAACAC TGACAGAGTG ATGTCCAGCT ATGCATGGGA ACTCTCTGAA
GGTGAGTGCC AAAAGGTCAT GATAGCGATG GCTGTCGCCA ATCAACCCCG CTTACTCATC
GCAGATGAGC CAACAAACTC GATGGAAGTA CAGACTCAAG CTCAGATCTT CAGGCTCTTG
AGTAAACTTA ATCAACTTCA GGGCGTATCA ATACTGCTCA TAAGTCATGA GCTAGAGACA
CTCTCTATGT GGTGCGATCA ACTCTCAGTG ATGTATTGTG GCCAGGTTAT GGAATCGGGC
CCCACATCAG AGATAGTTGA ACGCCCTTTT CACCCCTACA CAAAAACACT TTTGGACAAT
ATTCCGAACT ATTCAGGCAC TATGAATCAC AAAAGTATGA TGCCTACCCT ACCGGGATCG
GCACCAGCCC TACAGCATCT CCCTATCGGA TGCCGGCTAG GTCCAAGATG TCCAGAAGCA
CAAAAAAAAT GTGTGAATAA GCCCAATTTA TGTCACAAAA AGAACCGCTA TTTCGCATGC
CATTTTCCGT ATCATGAAGA GCAATGTAAT GACGACTCCA CTCCTTCAAG TTAA
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| Protein sequence | MPLLDIRNLT IELDTPHGRV KALERVSLTV NPAEVHGLVG ESGSGRSLLA RAILGIPGHN
WSITADRMMW DGRNLLEMSP KQRRNLMGSE ISMIFQDPSS SLDPVISIGD QLIEAMPSHK
NIPFWRRGKK RKQTAEKWLH KVGIKNTDRV MSSYAWELSE GECQKVMIAM AVANQPRLLI
ADEPTNSMEV QTQAQIFRLL SKLNQLQGVS ILLISHELET LSMWCDQLSV MYCGQVMESG
PTSEIVERPF HPYTKTLLDN IPNYSGTMNH KSMMPTLPGS APALQHLPIG CRLGPRCPEA
QKKCVNKPNL CHKKNRYFAC HFPYHEEQCN DDSTPSS
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