| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3094 |
|---|
| Symbol | |
|---|
| ID | 6117410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3791537 |
|---|
| End bp | 3792931 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641634636 |
|---|
| Product | anion transporter |
|---|
| Protein accession | YP_001761460 |
|---|
| Protein GI | 170727434 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.962564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000460999 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAG AACAAACCGA TGATGCTTTG ATAGCATCAA CATCTGATAA CGCACATAGA
AAGAAACTAC TGATCCTATT CGCCGATATC CTGCTATTTC TTCTACTCTA TAATTTTCTC
CCGTTCGATG AAGGAGTCAA CACTGGCTTC TCAGTGTTAA TCTTTATCGC GATCCTCTGG
CTGACCGAAG CTATCCATAT CAGTATTACC GCCATATTAG TCCCCATCTT AGCGGTGACG
TTAGGAGTCT TTGAAACAAA AACGGCAATG AGCAACTTTG CCAACCCCAT TATCTACCTA
TTCTTTGGTG GCTTTGTGCT TGCAGCCGCC CTAAACCATC AAGGGATCGA TAAGTTAATT
GCCCAAAAGG TGTTAACGGC TTCCAAAGGA AAGCTCAGCC TCGCCTGTAT GTTTTTGTTT
GGGATCACAG CGCTTCTCTC AATGTGGATA AGCAACACAG CAACAGCGGC TATGATGCTG
CCTCTTGCTT TAGGTATATT GCAGCAGCTC GACTTTAAGG AGCACAAGAG CACTTATCTA
TTTATGCTGT TAGGGATAGC CTATTCAGCT AACATCGGCG GCATAGGCAC ACTGGTAGGC
AGCCCGCCAA ACGCCATCGC CGCCGCTCAA GTTGGACTGA GTTTCAGTGA CTGGCTTGAG
TTTGGCCTGA TAACTGTCGC ACTTATGCTA CCCAGCATGC TGATAGCCCT TTACCTTTTT
CTAAGACCAA ATTTAAGCGT GATTTGTGAG CTTACTAAAT CAGACGCTAA GCTCAACTAT
CAAGGAAAGT TAACCCTATT AATCTTTATC TCAACGGTCT GTTGCTGGAT CTTTAGTAAA
CCGCTTTCAC AAGCTCTGGG AGGCATCCCT CAATTTGATA CCATTGTCGC CTTAGGCGCT
GTGGTTCTGC TGGCTGGGCT TGGCCTTGTA GAGTGGAAAA AGATTGAACG CACCACAGAT
TGGGGCGTGT TGATCCTCTT TGGTGGCGGC TTGACCTTAA GTGCTATCTT AAAAGCGACG
GGAACCAGTG TGTTTCTCGC CCATTGGGTG ACAGATATTT TTGGTAATAC TCATATGGCA
CTGTTTACTT TTGCCGTTAT CTTTTTTGTC ATCATGCTCA CTGAATTTGC CAGCAATACC
GCCAGCGCTG CACTACTCGT GCCCGTGTTT GCTGCCATTG CAGAAGCATT AGGTCTCTCT
CCGGTAATGC TTTCGGTATT AATCGGGATC GCAGCCTCCT GCGCCTTTAT GCTTCCCGTT
GCCACCCCAC CTAACGCCAT CGTGTATGGC TCTGGGTTTA TTAAGCAATC AGAGATGATG
CGCGCTGGTG TAATTATCAA CTTTGTCAGC ATGTTTGTGC TTTATATCAT CGCTCACACC
TTCTGGAGCT TTTAA
|
|---|
| Protein sequence | MSIEQTDDAL IASTSDNAHR KKLLILFADI LLFLLLYNFL PFDEGVNTGF SVLIFIAILW
LTEAIHISIT AILVPILAVT LGVFETKTAM SNFANPIIYL FFGGFVLAAA LNHQGIDKLI
AQKVLTASKG KLSLACMFLF GITALLSMWI SNTATAAMML PLALGILQQL DFKEHKSTYL
FMLLGIAYSA NIGGIGTLVG SPPNAIAAAQ VGLSFSDWLE FGLITVALML PSMLIALYLF
LRPNLSVICE LTKSDAKLNY QGKLTLLIFI STVCCWIFSK PLSQALGGIP QFDTIVALGA
VVLLAGLGLV EWKKIERTTD WGVLILFGGG LTLSAILKAT GTSVFLAHWV TDIFGNTHMA
LFTFAVIFFV IMLTEFASNT ASAALLVPVF AAIAEALGLS PVMLSVLIGI AASCAFMLPV
ATPPNAIVYG SGFIKQSEMM RAGVIINFVS MFVLYIIAHT FWSF
|
|---|
| |