Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2980 |
Symbol | |
ID | 6117295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3650187 |
End bp | 3651701 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634522 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001761346 |
Protein GI | 170727320 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.470057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.120272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGTA TTGTCGGAAT AGTTGGTCGA ACTTCGGTTA ATCAACCAAT TTATGATGCA TTAACTGTAC TCCAGCATCG CGGTCAAGAT GCTGCTGGTA TCGTGACTGT AGATGGTAAT GCGTTTAGAT TGCGCAAAGC CAATGGTCTG GTAAAAGACG TGTTTGAAGC TAAACATATG CAGCGTCTAC AGGGTAAAAC GGGTATAGGG CATGTACGTT ACCCTACGGC TGGAAGTTCG AGTGCATCGG AAGCTCAGCC TTTCTATGTT AACTCGCCAT TTGGGATCTC GCTTGCCCAT AACGGTAACT TGACCAATAC AGTCGAATTG CACGAGCTTT TACTTAAGCG ACGCCGTCAT GTTAATACGA CATCTGACTC AGAAGTTTTA TTAAACTTGC TCGCCGATGA GTTACAGCAG TGCAAGAATG AGAGTTTAAG CTCTGAAGAG GTGTTTGATG CTGTTGCTAA AGTGCACTCA TTGACACGTG GTGCATATGC GGTAACCGCT CTTATTATTG GTCAAGGGTT AGTGGCATTT CGTGATCCTT TCGGGATCCG TCCATTGGTG TTGGGTAAAC AGGAGACTGA ACTCGGCACT GAATATATGA TTGCCTCAGA GAGTGTTGCG CTGGATGCTG TTGGTTTTGA GCTGATGCGT GATGTTGCAC CTGGTGAAGC GGTATACATT ACCCTTGATG GTGAGCTCTA TACTCAACAG TGTGCACACA CGCCAAGTTA TGCTCCTTGC TTGTTTGAGT TTGTCTATTT TGCCCGTCCA GATTCCACTA TCGATAAGGT TTCTGTCTAT GGCAGCCGTG TTAACATGGG GGCTAAATTA GGTGAGAAGA TTAAGCGAGA GTGGGAGGAC CATGATATTG ATGTGGTTAT TCCTATTCCA GAAACCTCTT GTGATACAGC ACTTGAGATT GCACGTCATC TGGAGCTTCC ATACCGCCAA GGTTTTGTGA AAAATCGCTA TATTGGCCGC ACCTTTATTA TGCCTGGTCA ACAGGAGCGT AAGAAGTCAG TACGTCGTAA ACTTAATGCT ATTGGTGTTG AGTTTAAAGG CAAAAATGTA CTGCTTGTGG ATGATTCTGT GGTACGTGGT ACAACATCTG AGCAGATTAT TGAGATGGCT CGTGAAGCAG GCGCTAAGAA AGTGTATTTT GCTTCTGCAG CACCAGAAAT CCGCTTCCCT AATGTTTATG GTATCGATAT GCCAACGGCA AGTGAGCTGA TAGCCCACGG TAGAGATGTT GATGAGATCA GTAAGATGAT TGGCGCCGAT GGGATGATCT TCCAAGATTT GGAAGATCTT GCAGAAGCCG TTCGTATGGA AAACCCTGAG ATTAAACGTT TCGAAACTTC TGTTTTTGAT GGTAACTATA TTACTAACGA TGTGGATCAG GCTTATCTGG ACCATATTAC AAAGTTACGT AATGATGATG CTAAAGCGAA TCGAAGCAAA GATATCGGGA CTAACCTTGA GCTGCATAAT GTGTGTCACC CATAA
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Protein sequence | MCGIVGIVGR TSVNQPIYDA LTVLQHRGQD AAGIVTVDGN AFRLRKANGL VKDVFEAKHM QRLQGKTGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL HELLLKRRRH VNTTSDSEVL LNLLADELQQ CKNESLSSEE VFDAVAKVHS LTRGAYAVTA LIIGQGLVAF RDPFGIRPLV LGKQETELGT EYMIASESVA LDAVGFELMR DVAPGEAVYI TLDGELYTQQ CAHTPSYAPC LFEFVYFARP DSTIDKVSVY GSRVNMGAKL GEKIKREWED HDIDVVIPIP ETSCDTALEI ARHLELPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA IGVEFKGKNV LLVDDSVVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTA SELIAHGRDV DEISKMIGAD GMIFQDLEDL AEAVRMENPE IKRFETSVFD GNYITNDVDQ AYLDHITKLR NDDAKANRSK DIGTNLELHN VCHP
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