| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2936 |
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| Symbol | |
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| ID | 6117251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3592665 |
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| End bp | 3594617 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634480 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001761304 |
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| Protein GI | 170727278 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.805657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.713811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATT CAGTGATAGA CCAGCACATC TCAAACGTAT ACAGCTCTAT TGAAAACAAG
GGTATAGAGA AGAATGTCGT TATTAATTCC TGGAAACGAT GTATTGAAAC CTTCAAGCTT
GACCCTCTGA GTCGCCAGCC TTCCCGCGTA TTAACCCATT CCGAGCTACA GAATCATACC
TATCCTATTG AAGAATTTAT CACTACCGCA CGGGAGGGGA TGAAAACGCT TTATGCACAA
GTACAAGCAC TCGACTATGT GGTATTACTT TGTGATAGAA AAGGAGTCAC TGTCGATTAT
ATTGGTAATG ATAGACTGAA CAAAGAACTT AGAAACTCAG GGCTTTACCT AGGTGCAGAC
TGGAATGAAA GGCATGCAGG AACCTGCGCA GTAGGAACAT TAATCAACGA ACATGAGCCG
ATGACGATAC ATCAACAAGA TCATTTTGAC ATTGTGAACA CAACATTAAC TTGCTCTGCT
TCGCCAATTT TAGATCACGA TGGTCAGTTA CTGGCTGTAT TAGATGTGTC TGCACTGCAC
TCGCCAAAAG AGAAAAGTAG CCAACATTTA CTGCTAAAGT TAGTGCAAAT GCATGCTAGA
TTTATCGAGT CAGCACATTT CCTTAATTAC TATCGCGAAC ACACCATTTT AAAGTTTGAT
TTCAATGTCT GTACGTTATC AACTAATTGC CCTAACCTAA TCGCATTAGA TAACCACAAC
GTCATTGTTG GTGCCAATCA AAATGCACGA AAAATCATGG CACGTGAACT TGGCATTAAA
GATATCACCT CTCAACTGTT AACTGGATTT GAATTTACTT CACTGTTTGA ACTAAGTAAA
AGCAAAAACA CCGCTTCATT TGACTACTAT TTATTTATAT CTAGAAATAC GGGACTTTCA
TTTTTCTGTG ACATTCAAAC ACCTAAAACA AAGAGTAAAA GGCTGTTTAA TCCAGTACAA
AATACCACTC ATGAGCCTGT AAATATCGTA GCAGAGATAG ATAAGCTTGC AGGTCATGAC
CCTTCCATGT CTAAAGTCAA ACAGCTGGCC AACAAATTTG CTCCCACAGA CATTAATATT
TTAATTAGAG GAGAAACCGG CACAGGTAAA GAAGTACTTG CTAAAGCCAT TCATGACAGC
AGTAAACGCA GTGATGGGCC TTTTATTGCC GTGAACTGCG CAGCTTTACC TGATAGTTTG
ATTGAAAGCG AGCTGTTTGG TTATAAATCA GGCAGTTTCA CAGGTGCAAA CAGTAAAGGT
AAATCAGGGC TTATTCTCGC GGCAGATCAA GGCACACTTT TCTTGGATGA AATCGGCGAT
ATGCCCTCCT CCTTACAAAC TAGGCTGCTG AGGGTTTTGG CCGAAAAAGA GGTCACTCCT
GTAGGCTCAG ACAAACCCAT CAAGGTCAAT TTTCGGCTCA TCAGTGCCAC TCATCAAGAA
GTTGCACCAC AAAATGCGCC GAATAAAAAC GATTTTAGAG CAGATTTATA CCACCGCCTT
AATGGCGCAA CCATCAACTT GCCGCCACTG CGTGACCGAC AGGATATCTA TTATCTTATC
TCCAAGTTGA TAGGCAAAGA ATCAAATGTG AACTTGTCTA AATCCAGTTT AGAGGTGCTC
ACTGAGTACG CTTGGCCGGG CAACATTCGC GAGTTAAAGA ATGTGATTAA CTATGCCTGC
ACCCTGTGTG ATGGAAAAGG GATACGATCA GAACATTTAC CTGATTACGT CTTTATCCGT
GATCCATTTA TCGTTAACAA ACACAGTCAC TCTCCTATAA GGCATCTCGA AACGTTATCC
GAAGAGGGAC AAGAGTTGTT ACTAACGCTG AGAAATAATA ATTGGAATGC GACGGCTTCA
GCCAAAAAAC TCAACATTGG ACGAGCTACA CTGTATAGAA AAATGAAAAA ATTCAACATT
ATATCTCCCA ACAATACTGA CCTAACTTAC TAG
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| Protein sequence | MRNSVIDQHI SNVYSSIENK GIEKNVVINS WKRCIETFKL DPLSRQPSRV LTHSELQNHT
YPIEEFITTA REGMKTLYAQ VQALDYVVLL CDRKGVTVDY IGNDRLNKEL RNSGLYLGAD
WNERHAGTCA VGTLINEHEP MTIHQQDHFD IVNTTLTCSA SPILDHDGQL LAVLDVSALH
SPKEKSSQHL LLKLVQMHAR FIESAHFLNY YREHTILKFD FNVCTLSTNC PNLIALDNHN
VIVGANQNAR KIMARELGIK DITSQLLTGF EFTSLFELSK SKNTASFDYY LFISRNTGLS
FFCDIQTPKT KSKRLFNPVQ NTTHEPVNIV AEIDKLAGHD PSMSKVKQLA NKFAPTDINI
LIRGETGTGK EVLAKAIHDS SKRSDGPFIA VNCAALPDSL IESELFGYKS GSFTGANSKG
KSGLILAADQ GTLFLDEIGD MPSSLQTRLL RVLAEKEVTP VGSDKPIKVN FRLISATHQE
VAPQNAPNKN DFRADLYHRL NGATINLPPL RDRQDIYYLI SKLIGKESNV NLSKSSLEVL
TEYAWPGNIR ELKNVINYAC TLCDGKGIRS EHLPDYVFIR DPFIVNKHSH SPIRHLETLS
EEGQELLLTL RNNNWNATAS AKKLNIGRAT LYRKMKKFNI ISPNNTDLTY
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