Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2900 |
Symbol | |
ID | 6117215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3545212 |
End bp | 3547854 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634444 |
Product | hypothetical protein |
Protein accession | YP_001761268 |
Protein GI | 170727242 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000339287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00411804 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTAACA AGAAACCATC ATGGTTACTG CCCTCTCTTG TGGCCAGTGC CGTCGCGCTA AGTCTAAGTG GATGTTCATC GGATGATGAT GACCCAGTTG TAGAGGATAA GCCTGCGGTA TTACCTATCC CCGACCCCAC ACCTAGCTTC CCCGAGGGAG CTATCATGAT TGAAGATGGG GAAAACCTGA CTATCCGAAT TCAGGAAGCC TTGATTAACG CCCAGAGCAA TGACGTTATC GTGCTGCCTA AGGGTAATTT CAAGATAGCC TCGACCTTAC TGTTTGATGG TGATGTCGAC GGTGATGGCT CAATGGCAAA AAATATCACC ATTATGGGAT ATGGCATGGA GGAGACAGTT TTAGACTTCT CTGAATCCCT AACCGGTGAT GGTATCTTCG TACAAAATGC AGTGAACGTT ATCATTCAAG ATCTCTCTGT GAATGAAGCT AAAAATAACG GTATTAAACT TAAGAACACA AACGGGATTA TCCTAAGACG TCTGGCGACA GTTTGGGAAG GTGAGCTCGA TGAAAACAAT GGCGCCTACG GCCTCTACCC TGTTGAATGT GAAAATATCC TGATTGAAGA CACCTATGTT CGAGGCAGCG CCGATGCGGG TATTTACGTC GGCCAGTCTG AGTATATTGT GGTTCGCCGC AATATCGCCA AAGAGAACGT GGCAGGTATT GAGATTGAAA ACTCAAAATA TGCTGATGTT TATGATAACG AAGCCGTAGG AAATACTGGT GGTATCTTAG TTTTTGATCT GCCGATTAAT AACCACAGGT ATGGCTCAAG CGTACGTATT TTCAATAATA AGGTATACGA CAATAACACC AAGAACTTCG CCAATGCCTC TGCCAATCCA GCAGGTGTCC ATATCGTTCC ACCAGGAACG GGCATGATCA TCCTCTCTAC CGATGATGTA GAGATCTTTA ATAACGAAAT TACCAACCAC GACACCATGG GCGTTGCGAT CACTAGCTTC TTTATCGCAG AACCTGATAT GAATGCATTT GTTGCTAACT ATGGACAAGC CGATCAACCC ATAGAAGATG GCTGGAGACC AACACCACGC AATATCTATC TCCATGACAA TGTGATCACC GGCTTTGGTA AAAAACCCAA TGGTTATCTT ATTGACGATA TTATCAAAGC CTATGTACTT ACCCATGGTC AGTTCCCTGG CGTTCTGTAT GACGGTTTAG GGGAGATGTT GTCCAATAAC GGCACTGCAG CGTATCTGGG CCTACAGGAG CAGCCCTTTG CCGAAGATGG CAGTGACAAT ATCTGTGCGA CTAATAATGG CGATGTTTCA TTTGGTCGAC TCTACGCCAA CGATAATACC GATCTTAGTA TCCCCGATGT TCTATTTGAG CCGACACAAG AAGAAATTAT GAAATGTGCT CAGCTCAGTT TACCCGTCCA CACTGTCACC TTTGGTGATG AGATTTTCGG TTGTGGCGTC GATGACGATG TAGCGGGTTG TGATGGCGGT AACTTAGTCG GTGGCGGTGG CACCATAGGT GAAGGAGAAG GCGGACTGGT AGGAGATGGA GATCTGGCCC TGTGTGAAAC AACAGGCGAT CAGGTCAATT GGGATGCGCT TTTAGGAGCT AACTGCCCAA ACTTGTCAGA TTATAATCTC TTTGCCGATA ATTCAGACCC ATCAACTGGC GCCAACTCTG GTGGCTTACC CTATGACATG AATACTCAAC TGTTCACTGA TTATGCAAGT AAATACCGTT TTGTATTTGT ACCAGAAGGA AAAGTGGCAA GTTACTCAGC CCAAGAAAGC ATGGATTTCC CAGTTGGTAC AGTGATAAGC AAAGCCTTCG CTCTGCCTGC TAATACTAAT GAACGCGGTC TAGACAAAGA AGATCTGGTT GAAACTCGCT TATTGATCCG TCGTGAAACC GGTTGGTCAG CTCTACCCTA TATCTACAAT GCAGAGAAAA GTGACGCCGT GTTAGCAAAA GCGGGGGCGA TTCAAGGTAA GCAGGTGGTC CATAATGGGG AAACGCTCGA TTTTGATTAT GTCGTACCGA GTATGAATCA ATGTAAGCAG TGTCACCAGT TCAAGGCAGC GCCTGATAGC CCAGCGATTT TTGTTCCTAT AGGGCCTAAA GCACGTTACC TAAACAAAGA CTATGCCTAT GCTGACGGCA CCATGAATCA GCTCATGAAG TGGCAAGCTG CAGGTATATT AGAGGGGGTA CCCGATGTGA CAAGCATTGA TACCGTTCCT ACATTTGCTG ACGGTGACGA AGCGGATTTA ACCTCGCTCT CAGACCAGCT GCTAATGGAA ACCGCTAAAG GTTACTTAGA TATTAACTGC GCACATTGCC ATCGTCCTGA AGGTAACGCT TCAAACACTG GGCTTACACT GGAGTACTGG AGACCCTATG CTGATGGGTT TGCACACGGA ACCTGTAAAT CGCCAGTGGC CTACGGTGGT GGAGAGCTTA GTTATGATGT AGTGCCCTCA GCTCCTGAGC GCTCTATCCT TCACTTCAGA ATGGATACTA ATGAACCAGG CGATCGCATG CCTGAGATTG GGCGTAGCTT AACCCATGGT GAGGGTGTTG AGCTTATCCA TGAGTGGATA AGACGTCTAC CTTTAGCCAG CTGTTCACAG TAA
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Protein sequence | MFNKKPSWLL PSLVASAVAL SLSGCSSDDD DPVVEDKPAV LPIPDPTPSF PEGAIMIEDG ENLTIRIQEA LINAQSNDVI VLPKGNFKIA STLLFDGDVD GDGSMAKNIT IMGYGMEETV LDFSESLTGD GIFVQNAVNV IIQDLSVNEA KNNGIKLKNT NGIILRRLAT VWEGELDENN GAYGLYPVEC ENILIEDTYV RGSADAGIYV GQSEYIVVRR NIAKENVAGI EIENSKYADV YDNEAVGNTG GILVFDLPIN NHRYGSSVRI FNNKVYDNNT KNFANASANP AGVHIVPPGT GMIILSTDDV EIFNNEITNH DTMGVAITSF FIAEPDMNAF VANYGQADQP IEDGWRPTPR NIYLHDNVIT GFGKKPNGYL IDDIIKAYVL THGQFPGVLY DGLGEMLSNN GTAAYLGLQE QPFAEDGSDN ICATNNGDVS FGRLYANDNT DLSIPDVLFE PTQEEIMKCA QLSLPVHTVT FGDEIFGCGV DDDVAGCDGG NLVGGGGTIG EGEGGLVGDG DLALCETTGD QVNWDALLGA NCPNLSDYNL FADNSDPSTG ANSGGLPYDM NTQLFTDYAS KYRFVFVPEG KVASYSAQES MDFPVGTVIS KAFALPANTN ERGLDKEDLV ETRLLIRRET GWSALPYIYN AEKSDAVLAK AGAIQGKQVV HNGETLDFDY VVPSMNQCKQ CHQFKAAPDS PAIFVPIGPK ARYLNKDYAY ADGTMNQLMK WQAAGILEGV PDVTSIDTVP TFADGDEADL TSLSDQLLME TAKGYLDINC AHCHRPEGNA SNTGLTLEYW RPYADGFAHG TCKSPVAYGG GELSYDVVPS APERSILHFR MDTNEPGDRM PEIGRSLTHG EGVELIHEWI RRLPLASCSQ
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