Gene Swoo_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2900 
Symbol 
ID6117215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3545212 
End bp3547854 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content46% 
IMG OID641634444 
Producthypothetical protein 
Protein accessionYP_001761268 
Protein GI170727242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000339287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00411804 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTAACA AGAAACCATC ATGGTTACTG CCCTCTCTTG TGGCCAGTGC CGTCGCGCTA 
AGTCTAAGTG GATGTTCATC GGATGATGAT GACCCAGTTG TAGAGGATAA GCCTGCGGTA
TTACCTATCC CCGACCCCAC ACCTAGCTTC CCCGAGGGAG CTATCATGAT TGAAGATGGG
GAAAACCTGA CTATCCGAAT TCAGGAAGCC TTGATTAACG CCCAGAGCAA TGACGTTATC
GTGCTGCCTA AGGGTAATTT CAAGATAGCC TCGACCTTAC TGTTTGATGG TGATGTCGAC
GGTGATGGCT CAATGGCAAA AAATATCACC ATTATGGGAT ATGGCATGGA GGAGACAGTT
TTAGACTTCT CTGAATCCCT AACCGGTGAT GGTATCTTCG TACAAAATGC AGTGAACGTT
ATCATTCAAG ATCTCTCTGT GAATGAAGCT AAAAATAACG GTATTAAACT TAAGAACACA
AACGGGATTA TCCTAAGACG TCTGGCGACA GTTTGGGAAG GTGAGCTCGA TGAAAACAAT
GGCGCCTACG GCCTCTACCC TGTTGAATGT GAAAATATCC TGATTGAAGA CACCTATGTT
CGAGGCAGCG CCGATGCGGG TATTTACGTC GGCCAGTCTG AGTATATTGT GGTTCGCCGC
AATATCGCCA AAGAGAACGT GGCAGGTATT GAGATTGAAA ACTCAAAATA TGCTGATGTT
TATGATAACG AAGCCGTAGG AAATACTGGT GGTATCTTAG TTTTTGATCT GCCGATTAAT
AACCACAGGT ATGGCTCAAG CGTACGTATT TTCAATAATA AGGTATACGA CAATAACACC
AAGAACTTCG CCAATGCCTC TGCCAATCCA GCAGGTGTCC ATATCGTTCC ACCAGGAACG
GGCATGATCA TCCTCTCTAC CGATGATGTA GAGATCTTTA ATAACGAAAT TACCAACCAC
GACACCATGG GCGTTGCGAT CACTAGCTTC TTTATCGCAG AACCTGATAT GAATGCATTT
GTTGCTAACT ATGGACAAGC CGATCAACCC ATAGAAGATG GCTGGAGACC AACACCACGC
AATATCTATC TCCATGACAA TGTGATCACC GGCTTTGGTA AAAAACCCAA TGGTTATCTT
ATTGACGATA TTATCAAAGC CTATGTACTT ACCCATGGTC AGTTCCCTGG CGTTCTGTAT
GACGGTTTAG GGGAGATGTT GTCCAATAAC GGCACTGCAG CGTATCTGGG CCTACAGGAG
CAGCCCTTTG CCGAAGATGG CAGTGACAAT ATCTGTGCGA CTAATAATGG CGATGTTTCA
TTTGGTCGAC TCTACGCCAA CGATAATACC GATCTTAGTA TCCCCGATGT TCTATTTGAG
CCGACACAAG AAGAAATTAT GAAATGTGCT CAGCTCAGTT TACCCGTCCA CACTGTCACC
TTTGGTGATG AGATTTTCGG TTGTGGCGTC GATGACGATG TAGCGGGTTG TGATGGCGGT
AACTTAGTCG GTGGCGGTGG CACCATAGGT GAAGGAGAAG GCGGACTGGT AGGAGATGGA
GATCTGGCCC TGTGTGAAAC AACAGGCGAT CAGGTCAATT GGGATGCGCT TTTAGGAGCT
AACTGCCCAA ACTTGTCAGA TTATAATCTC TTTGCCGATA ATTCAGACCC ATCAACTGGC
GCCAACTCTG GTGGCTTACC CTATGACATG AATACTCAAC TGTTCACTGA TTATGCAAGT
AAATACCGTT TTGTATTTGT ACCAGAAGGA AAAGTGGCAA GTTACTCAGC CCAAGAAAGC
ATGGATTTCC CAGTTGGTAC AGTGATAAGC AAAGCCTTCG CTCTGCCTGC TAATACTAAT
GAACGCGGTC TAGACAAAGA AGATCTGGTT GAAACTCGCT TATTGATCCG TCGTGAAACC
GGTTGGTCAG CTCTACCCTA TATCTACAAT GCAGAGAAAA GTGACGCCGT GTTAGCAAAA
GCGGGGGCGA TTCAAGGTAA GCAGGTGGTC CATAATGGGG AAACGCTCGA TTTTGATTAT
GTCGTACCGA GTATGAATCA ATGTAAGCAG TGTCACCAGT TCAAGGCAGC GCCTGATAGC
CCAGCGATTT TTGTTCCTAT AGGGCCTAAA GCACGTTACC TAAACAAAGA CTATGCCTAT
GCTGACGGCA CCATGAATCA GCTCATGAAG TGGCAAGCTG CAGGTATATT AGAGGGGGTA
CCCGATGTGA CAAGCATTGA TACCGTTCCT ACATTTGCTG ACGGTGACGA AGCGGATTTA
ACCTCGCTCT CAGACCAGCT GCTAATGGAA ACCGCTAAAG GTTACTTAGA TATTAACTGC
GCACATTGCC ATCGTCCTGA AGGTAACGCT TCAAACACTG GGCTTACACT GGAGTACTGG
AGACCCTATG CTGATGGGTT TGCACACGGA ACCTGTAAAT CGCCAGTGGC CTACGGTGGT
GGAGAGCTTA GTTATGATGT AGTGCCCTCA GCTCCTGAGC GCTCTATCCT TCACTTCAGA
ATGGATACTA ATGAACCAGG CGATCGCATG CCTGAGATTG GGCGTAGCTT AACCCATGGT
GAGGGTGTTG AGCTTATCCA TGAGTGGATA AGACGTCTAC CTTTAGCCAG CTGTTCACAG
TAA
 
Protein sequence
MFNKKPSWLL PSLVASAVAL SLSGCSSDDD DPVVEDKPAV LPIPDPTPSF PEGAIMIEDG 
ENLTIRIQEA LINAQSNDVI VLPKGNFKIA STLLFDGDVD GDGSMAKNIT IMGYGMEETV
LDFSESLTGD GIFVQNAVNV IIQDLSVNEA KNNGIKLKNT NGIILRRLAT VWEGELDENN
GAYGLYPVEC ENILIEDTYV RGSADAGIYV GQSEYIVVRR NIAKENVAGI EIENSKYADV
YDNEAVGNTG GILVFDLPIN NHRYGSSVRI FNNKVYDNNT KNFANASANP AGVHIVPPGT
GMIILSTDDV EIFNNEITNH DTMGVAITSF FIAEPDMNAF VANYGQADQP IEDGWRPTPR
NIYLHDNVIT GFGKKPNGYL IDDIIKAYVL THGQFPGVLY DGLGEMLSNN GTAAYLGLQE
QPFAEDGSDN ICATNNGDVS FGRLYANDNT DLSIPDVLFE PTQEEIMKCA QLSLPVHTVT
FGDEIFGCGV DDDVAGCDGG NLVGGGGTIG EGEGGLVGDG DLALCETTGD QVNWDALLGA
NCPNLSDYNL FADNSDPSTG ANSGGLPYDM NTQLFTDYAS KYRFVFVPEG KVASYSAQES
MDFPVGTVIS KAFALPANTN ERGLDKEDLV ETRLLIRRET GWSALPYIYN AEKSDAVLAK
AGAIQGKQVV HNGETLDFDY VVPSMNQCKQ CHQFKAAPDS PAIFVPIGPK ARYLNKDYAY
ADGTMNQLMK WQAAGILEGV PDVTSIDTVP TFADGDEADL TSLSDQLLME TAKGYLDINC
AHCHRPEGNA SNTGLTLEYW RPYADGFAHG TCKSPVAYGG GELSYDVVPS APERSILHFR
MDTNEPGDRM PEIGRSLTHG EGVELIHEWI RRLPLASCSQ