Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2887 |
Symbol | |
ID | 6117202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3531467 |
End bp | 3533608 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634433 |
Product | phosphate acetyltransferase |
Protein accession | YP_001761257 |
Protein GI | 170727231 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000745761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000011303 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTCTCGCA ATATTATGCT AATCCCTATC GGCACAGGTG TCGGTCTCAC ATCCATCAGT TTAGGACTCG TTCGAGCTTT TGAGCATCAC GGTGTTAAAG TTCGCTTTTT CAAACCGATT GCCCAGCAGC GTCCACAAGA CAGCGGACCC GAGCGTTCAA CGACTATCTT AAGTAAGTCG CCAACTGTTA ACCCGCTTGA GCCTTTCGAT ATGGATCATG CAGAGGGACT TATTCGTGGC GATAAGACTG ACGTCTTGAT GGAGCAGATC ATTGCTCGCG TAACGGAGAG CACTGACGAC ACTGAAACTC TCGTGGTTGA AGGCTTAGTT CAAACAAGAA ACCACCCGTT CTCAAGCGAT ATCAACTATG CTATCGCAAA ATCTCTCGAT GCTGACATCA TCTTTGTTGC CACGCCAGGT AATGAAAGTG CTACAGCCTT GATGAACCGT TTAGAGATCG CCCATAACAA ATGGGGCGGT GTTAAGAACA AGCGTATTAT CGGCGCCATG ATCAATAAAA TTGGTGCACC TGTTGATAAC GAAGGTCGTG CACGTCCTGA TCTATCTGAA GTGTTCGACC ATGCAGATGT TCAGCGCCCT GACGCTGCCA GCATGTTCCA ACTTCCAGGT AAGAGTTCAC TGCGTATTTT AGGTAGTGTG CCTTATAACT TAGACCTTGT TGCACCTCGC GCATCGGATC TTGCTAAGCA CTTAAGTGCA AAGATCATTA ATGCTGGTGA GATGAACACT CGTCGTCTAC GTAAAGTGAC CTTCTGTGCT CGTAGTATTC CTAACATGGT TACTCACATT AAGACTGACT CACTGTTAGT TACCTCAGGC GATCGCTCTG ATGTGATCGT ATCAGCCTGT CTTGCAGCGA TGAACGGCGT AAAAGTCGGT GCACTACTGC TAACCGGTAG TTATGAGCCA GAGCCAGAGA TCATGGCATT GTGTGAGCAA GCATTCGAAA CCGGTCTACC AGTATTCCTA ATCGATACGA ATACTTGGCA GACATCGCTA AACATTCAAC GTTTCGACCA TGAAGTCCCT GTTGATGACG CAGTGCGCAT CGAAGAGGTT CAAGAGTATG TTGCTAGCCA TATCGACCAA AACTGGATTG AAACGGCAAC TAAAAACTCT CCTCGTGAGC ACAGACTCTC TCCTCCTGCA TTTAGATACA AACTGACTGA GCTTGCCCGT GCTGCCCGTA AAACAGTTGT ACTGCCTGAA GGTCATGACT CACGTACTAT CGAAGCTGCA AGCATCTGTG CTGAACGTGG CATCGCCAAG TGTGTACTTC TTGGTAATCG TGAAGAGATC GAACGTATCG CTGCACAACA AGGTGTCACT TTAGGTGAAG GCGTTGAGAT TGTTGAGCCT GATACTGCAC GTGAGCGTTA TATCGAGCCT ATGCTTGATC TACGTCGTCA CAAAGGCCTA ACTGAAGTCG TAGCCCGTGA ACAACTCGGT GACAACATGG TACTAGGGAC CATGATGCTA GCTCAAAATG AAGTCGACGG TATTGTCTCT GGTGCGGTAA ACACCACAGC TAACACCATT CGCCCACCAT TACAGTTGAT TAAAACGGCC CCAGGTTCAA GTTTAGTCTC GTCAATCTTC TTTATGTTGA TGCCAGATCA AGTACTGATC TACGGTGACT GTGCAATTAA CCCTGATCCA AATGCCGATC AACTTGCCGA TATCGCTATC CAGTCCGCAG ATTCAGCCGC GGCATTTGGT ATCGAGCCAC GGGTTGCAAT GATCAGTTAC TCTACCGGTA GTTCAGGTAC TGGCTCTGAT GTTGATAAGG TACGTGAAGC AACGCGTATC GCTAAAGAGA AGCGTCCAGA TCTGATCATC GATGGTCCAT TGCAGTATGA TGCTGCGGTT ATGCCAAATG TTGCTCAATC TAAAGCCCCT AACAGTCCTG TAGCTGGTCA AGCAACGGTA TTTGTATTCC CAGACCTAAA TACTGGTAAT ACGACATACA AAGCAGTACA GAGAAGTGCA GACCTAATCA GTATTGGCCC AATGCTTCAA GGTATGCGTA AGCCAGTTAA CGACCTATCA CGTGGCGCAT TGGTTGACGA TATCGTTTAC ACCATCGCAT TAACGGCAAT TCAGGCTTCA CAAGCTGAGT AA
|
Protein sequence | MSRNIMLIPI GTGVGLTSIS LGLVRAFEHH GVKVRFFKPI AQQRPQDSGP ERSTTILSKS PTVNPLEPFD MDHAEGLIRG DKTDVLMEQI IARVTESTDD TETLVVEGLV QTRNHPFSSD INYAIAKSLD ADIIFVATPG NESATALMNR LEIAHNKWGG VKNKRIIGAM INKIGAPVDN EGRARPDLSE VFDHADVQRP DAASMFQLPG KSSLRILGSV PYNLDLVAPR ASDLAKHLSA KIINAGEMNT RRLRKVTFCA RSIPNMVTHI KTDSLLVTSG DRSDVIVSAC LAAMNGVKVG ALLLTGSYEP EPEIMALCEQ AFETGLPVFL IDTNTWQTSL NIQRFDHEVP VDDAVRIEEV QEYVASHIDQ NWIETATKNS PREHRLSPPA FRYKLTELAR AARKTVVLPE GHDSRTIEAA SICAERGIAK CVLLGNREEI ERIAAQQGVT LGEGVEIVEP DTARERYIEP MLDLRRHKGL TEVVAREQLG DNMVLGTMML AQNEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF FMLMPDQVLI YGDCAINPDP NADQLADIAI QSADSAAAFG IEPRVAMISY STGSSGTGSD VDKVREATRI AKEKRPDLII DGPLQYDAAV MPNVAQSKAP NSPVAGQATV FVFPDLNTGN TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAS QAE
|
| |