Gene Swoo_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2850 
Symbol 
ID6117165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3485165 
End bp3485938 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content43% 
IMG OID641634396 
Productputative sulfate transport protein CysZ 
Protein accessionYP_001761220 
Protein GI170727194 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000397841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCAAA CTGCTGAAAG ACCCAAAAAA AGTGGCGTTA ACTATTTTCT TGATGGCTTT 
AGCTTGATCA AAACCAAAGG GCTAAGAAGC TTTGTGTTTA TCCCGCTGAT GATAAACTTA
GTGCTATTCG CAAGTGTGAT CTACTTCGCC ATCGGCCAGC TCGAACAGAT GTTTAACTGG
ATATCTTCTC AACTGCCCGA TTACTTAAGT TGGCTAAACT TCCTCTTGTG GCCACTAGCA
GTGCTCACAT TGCTGGTTGT GCTCTCTTTT CTATTCAGCT CAGTGATGAA CTGGTTAGCC
GCGCCCTTTA ATGGTTTATT AGCCGAGAAG GTTGAGCAAC ACCTTACGGG AAAAGATCTC
AATACTGGTA CCACAGTCGA CCTGGTCAAA GATCTTCCAC GTATCTTAGG TAGAGAGTGG
AAAAAACTTA AATATTACCT GCCAAGAGCA ATTATCTGCT TGATCTTATT CTGGATCCCA
TTTATCGGAC AAACCTTTGC ACCGATAATC TGGTTTATGT TCAGTGCCTG GATGATGGCG
ATTCAATATT GTGATTACCC ATTCGATAAT CATAAGGTTC CCTTCGACGA TATGAAGTTT
GCCCTTAATC AAACCAAAGG TAGCAGTTTT AGTTTCGGCG CTGCCGTTAC CCTGTTTTCG
ATGATCCCTA TCGTCAACTT TATTGTGATG CCAGTCGCCA TTTGTGGTGC AACATCCATG
TGGGTAGACA AGTATCGTGA AGCCTATAAA CACCCAGAGA TTGCGCCAGA GTAA
 
Protein sequence
MNQTAERPKK SGVNYFLDGF SLIKTKGLRS FVFIPLMINL VLFASVIYFA IGQLEQMFNW 
ISSQLPDYLS WLNFLLWPLA VLTLLVVLSF LFSSVMNWLA APFNGLLAEK VEQHLTGKDL
NTGTTVDLVK DLPRILGREW KKLKYYLPRA IICLILFWIP FIGQTFAPII WFMFSAWMMA
IQYCDYPFDN HKVPFDDMKF ALNQTKGSSF SFGAAVTLFS MIPIVNFIVM PVAICGATSM
WVDKYREAYK HPEIAPE