Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2831 |
Symbol | pntA |
ID | 6117146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3459241 |
End bp | 3460785 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641634377 |
Product | NAD(P) transhydrogenase subunit alpha |
Protein accession | YP_001761201 |
Protein GI | 170727175 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0117587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATCG GAATACCAAG GGAGATCCTT AACCAGGAGA GCCGGGTAGC CGCGACACCA GCCACTGTTG TTCAGCTTAA GAAATTAGGT TTCAGTGTTG TGGTGCAACG CGGTGCCGGC GAGGCAGCAA ATTTTAAAGA TGAAGCGTAT CAAGAAGCGG GTGCTGATAT CGTTAGCCTC GAAGAAGCGT TTCAAGCGGA TCTCATATTG AAAGTCAATG CGCCTACTAT CGATGTAGAT ACCGGCGTTG ATGAAGCCGA TCTATTGAAA GCCGGTGCGA CAGTGGCAAG CTTTGTATGG CCAGCCCAAA ATCCTGAGTT GTTAGAAAAG TTTAAGGCGA AGGGGATCAA CCTACTTGCC ATGGATATGG TGCCGCGTAT TTCACGTGCA CAATCTCTCG ATGCTCGTAG CTCATTAGCT AACGTAGATG GTTACCGCGC CGTTATCGAA GCAGCAAATC ACTTTGGTCG CTTCTTTACT GGACAGATCA CCGCTGCGGG TAAAGTGCCA CCGGCGAAAG TCTTAATCAT TGGTGCAGGT GTTGCAGGTC TTTCTGCCTT GGGAGCTGCG GGGAGTTTAG GAGCTATCGT TCGCGCCTTT GATACCCGTC CAGAAGTGAA AGAGCAGATT AACTCTATGG GCGCCGAGTT CTTAGAAGTT GATTTCGAAG AGGAGTCTGG CTCTGGTGAT GGTTATGCCA AAGTCATGAG TAAAGAGTTT ATCGAAGCTG AGATGGCACT GTTCCGCGAA CAGGCTAAAG AGGTTGATAT CATTATCACC ACAGCGCTAA TCCCCGGTAA ACCTGCACCT AAGCTTATCC TTGAAGATAT GGTTGGCTTA ATGAAGCCTG GTAGTGTCAT TGTCGATTTG GCGGCGGCTA ATGGCGGTAA CTGTGAACTG ACCGTACCCG GAGAAGTGGC TGTGGTTAAC GATGTGACTA TTATCGGTTA TACCGAACTG TCGCGCCGTT TACCGACACA AGCAAGTCAG CTATACGGTA CGAACTTAGT GAACCTGCTT AAGCTGATGG TGCCAGAGAA AGATGGCAAC TTTGTGATTG ATTTCGACGA TGAAGTTGTT CGCGGTGTGG CTGCGGTTAA AGATGGTGAG ATCACTTTCC CACCTCCAGT TATCCAGGTT AGCGCCCAGC CTCAAGCCAA AGCGGAAGAG GCGGTAGCTG AAGTTGTTGA GAAGAAAAAG AACCCTTGGA TAAAACCAGT CTTAGCTGTG GTAGCGGCAG GTTTATTTGG CCTAATTGCT AACTCTGCGC CAGCGGACTT CCTGCAGCAC TTTAGTGTCT TTGTGCTTTC CTGTGTTGTT GGTTATTACG TGGTTTGGAA TGTGAGTCAC TCCCTTCATA CTCCTTTGAT GAGTGTGACT AACGCGATCA GTGGCATCAT TGTTGTGGGT GCTTTAGTAC AGATGAATAG CGACAGTACG GCGGTACTCA TCTTATCCGG TATCGCGATA CTTATCGCTT CCATTAACAT TGCCGGTGGT TTCACCGTCA CTCAGCGTAT GCTGAAAATG TTCCGTAAAG ACTAA
|
Protein sequence | MQIGIPREIL NQESRVAATP ATVVQLKKLG FSVVVQRGAG EAANFKDEAY QEAGADIVSL EEAFQADLIL KVNAPTIDVD TGVDEADLLK AGATVASFVW PAQNPELLEK FKAKGINLLA MDMVPRISRA QSLDARSSLA NVDGYRAVIE AANHFGRFFT GQITAAGKVP PAKVLIIGAG VAGLSALGAA GSLGAIVRAF DTRPEVKEQI NSMGAEFLEV DFEEESGSGD GYAKVMSKEF IEAEMALFRE QAKEVDIIIT TALIPGKPAP KLILEDMVGL MKPGSVIVDL AAANGGNCEL TVPGEVAVVN DVTIIGYTEL SRRLPTQASQ LYGTNLVNLL KLMVPEKDGN FVIDFDDEVV RGVAAVKDGE ITFPPPVIQV SAQPQAKAEE AVAEVVEKKK NPWIKPVLAV VAAGLFGLIA NSAPADFLQH FSVFVLSCVV GYYVVWNVSH SLHTPLMSVT NAISGIIVVG ALVQMNSDST AVLILSGIAI LIASINIAGG FTVTQRMLKM FRKD
|
| |