Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2804 |
Symbol | |
ID | 6117113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3424013 |
End bp | 3424687 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634344 |
Product | two component transcriptional regulator |
Protein accession | YP_001761174 |
Protein GI | 170727148 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000183823 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATTT TGGTTGTTGA AGATGACCCA ATCCTTTCCC ATCACCTCAA GGTACAATTA AGTGAGTTAG GTAATCAGGT TCAAGTCGCA TTAACGGCTA AAGAGGGATT TTATCAAGCA ACCAACTACC CCATCGATGT CGCAATCGTC GACTTAGGCC TACCGGATCA AGATGGGATC AGTTTAATTC AAAGTTTGCG GGATAACGGC CTAAAAGCAC CGGTACTTAT CTTAACAGCT AGAGTCAACT GGCAAGATAA AGTTGAAGGC CTCAATGCTG GTGCCGATGA CTACTTAGTT AAGCCTTTTC AAAAAGAGGA GTTGGTGGCC AGGCTCGATG CCTTGGTCAG ACGCAGTGCC GGTTTCGTAA AACCTGTGAT CACCAGTGGC CCACTGAATT TAGACTTAGC TGCTAAACAG GTCACCATGC ATGAAGAGGT GATGGAGGTG ACCGCATTTG AATATCAAAT TCTAGAATAC CTGATGCGTC ATTGCCATGA AGTGGTTGCT AAACAGAGAC TATTAGATGT TGTTTATGCC GACAAAGAGG GCGATCCCAA TACTATTGAG GTGATGGTTT CACGGCTAAG AAAGAAACTG ACCAGTGGCG GACTGGATAA CCCTATCGCA ACCATACGTG GCCAAGGCTA CAAGTTTAAC CTGCCATGCA GTTAA
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Protein sequence | MRILVVEDDP ILSHHLKVQL SELGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI SLIQSLRDNG LKAPVLILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA GFVKPVITSG PLNLDLAAKQ VTMHEEVMEV TAFEYQILEY LMRHCHEVVA KQRLLDVVYA DKEGDPNTIE VMVSRLRKKL TSGGLDNPIA TIRGQGYKFN LPCS
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