| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2797 |
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| Symbol | |
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| ID | 6117106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3416220 |
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| End bp | 3417572 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634337 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001761167 |
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| Protein GI | 170727141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAGC AGAAACTTAA AATCCTTGTG GTTGAAGATG AGCCGGATCA GCGAAGTTTA
ATAACAAAAA TGTTGGCTGC AAATGGGTAT CAAACCAAGG GTGCTGAGAG TGTTGAGGAG
GCTATTTTAT CCATTAAATC GGAGCTGCCG GATCTGGTGT TTTCTGATTG GAAACTTGGT
CAGTTAACAG GGATGGATCT GCTTAATTAT GTGCGCCGAG AACAGCCCGA TATGGGATTT
ATTATCGCTA CAGCCTACGG GACTATTACC CATGCTGTAG ATGCAATGCA AGCGGGGGCT
GATGATTATC TGGCTAAACC TTATCAGAGG CAATCTTTGT TATTAGCTAT CGATAAAGTG
GCCAAATCCC TTGTGTTGAA ACGGCAAAAT CGCAGTCTTA CCTCTCAATT ATCTCAACAA
CAGGAGCTGG TGGGGTTAGT TGGTAAAGCC CCCTGCATGC AAAAAGTGTA TACGCGAGTC
CAACGTGTCA GTGCAACAGA TGCCACAGTG TTAATTGGTG GTGAGAGCGG CACCGGGAAA
GAGTTGGCTG CTAGGGCACT TTATCAGCTA TCAGATCGTA AGAATAAGCC CTTTGTTGCC
ATTAACTGTG GTGCAATTCC TGAAAACCTT GCCGAAGCTG AACTTTTTGG CGCAGAGAAG
GGAGCATTTA CCGGCGCAAC GACGTTGAAG ATTGGCAAAC TAGAAGCTGC AGATGGCGGC
ACTATCTTTC TCGACGAAAT TGGTGAACTG CCTTTACTAT TGCAAACCAA CTTGCTGCGT
TTTTTACAGG AGGGGGTGAT CAGCCGCTTA GGCCAGAATG GTGAGATAAA ACTTGATGTG
AGAGTGATAG CTGCGACTCA CAGAGATCTG CAACATGAAG TTTCAGAAGG ACGTTTTCGA
GAGGATCTCT ATTATCGCCT TAATGTTGTA CCGATACATA TGCCCCCCTT GAGAGAGAGG
CAAGAGGATA TTGGAAGGCT GGTGGATCAC TTCTTAAAGC TGCATGCGGG TCAATATAAT
CTGCCGCCAT TAAGTCTCAC TGGCGATACG ATGAAGCAGT TACTGGATTA CTCTTGGCCT
GGAAATGTCA GGGAGTTGGC TAATCGCATT GAACGCTTTG TCCTGTTAGG TGATGAACAG
GAGATGGTTG AAGAGTTAAG CTGCCAGCCT AAAACCATTA ACACGACCCA GTTTACCTTG
CCTGAAACAG GTATTGAGTG GGAGTCGTTT GAGAAAAACT GCCTTGAGCA AGCGATGAGC
AAGCATCAAG GAAATCGTAC TAAGGCGGCT AAGTTTCTAG GCCTGAGCTA TAAAGCATTT
CTCTACCGAT TGGAAAAATA TCAGTTAGTC TAG
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| Protein sequence | MLEQKLKILV VEDEPDQRSL ITKMLAANGY QTKGAESVEE AILSIKSELP DLVFSDWKLG
QLTGMDLLNY VRREQPDMGF IIATAYGTIT HAVDAMQAGA DDYLAKPYQR QSLLLAIDKV
AKSLVLKRQN RSLTSQLSQQ QELVGLVGKA PCMQKVYTRV QRVSATDATV LIGGESGTGK
ELAARALYQL SDRKNKPFVA INCGAIPENL AEAELFGAEK GAFTGATTLK IGKLEAADGG
TIFLDEIGEL PLLLQTNLLR FLQEGVISRL GQNGEIKLDV RVIAATHRDL QHEVSEGRFR
EDLYYRLNVV PIHMPPLRER QEDIGRLVDH FLKLHAGQYN LPPLSLTGDT MKQLLDYSWP
GNVRELANRI ERFVLLGDEQ EMVEELSCQP KTINTTQFTL PETGIEWESF EKNCLEQAMS
KHQGNRTKAA KFLGLSYKAF LYRLEKYQLV
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