Gene Swoo_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2778 
Symbol 
ID6117086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3394213 
End bp3395157 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content43% 
IMG OID641634318 
Producthypothetical protein 
Protein accessionYP_001761149 
Protein GI170727123 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AACTCAATAT TGGGATCAGC GCATGCGTCA TGGGGGAAAA TGTACGTTAT 
GACTCAGGCC ATAAACGCTC ACAATTTTGT ACCGAAGCAT TGTCAGAATT TGCTAACTTT
AAAGCATTCT GTCCAGAGGT TGCTATTGGA CTGCCCATTC CGCGGCCCAC AATCCGCCAG
ATAATAAAAG ATAACATTAT CACTGTATCT CGCCCTGATG GCAGTGGAGA TGTAACCGAA
AAATTAACGG CATATGGTAA GCAAGTTGGA GAGCAGATAA GCCATCTGAG TGGTTTTATA
TTTTGTGCTA AAAGTCCAAG TTGCGGTATG GAGCGAGTTA AGGTCCATCA CCATCATGGT
AAAGGTTCTG AGTCCAATGG CGTCGGTTTG TTTGCTCGTG AGGTAATGAA GGCTAATCCT
CTGTTACCTG CAGAGGAAAA TGGCAGACTC AATGATGCAG TGATCCGTGA AAACTTCATG
ACACGCGTGT TTACTTATCA AAAGTGGCTA GATTTAGCCG CCAGTGGCAT AACAAAGCAC
AAGCTTATTC AGTTTCATAG TGAGCAAAAG TACCTAGTGA TGAGCCACCA TATTGAGAGT
TATCGTCAGC TAGGGACGCT ACTTGGAAGT AGTGATTTAG CCCTTGATGA GTTAGCTAAC
CAGTATATCG CAGGTTTGAT GGAGGCACTT AAAAACAAGG CATCACGTAA GAGCCACACT
AACACATTAC ATCATCTGCA AGGTTACTTT AAAAAGCAGC TTGATCACGC AAAACGTCAG
GAGTTAACTG AGCAGATTGA TGCTTACAGG CTGGGGCTGA CACCACTCTT AGTGCCATTG
ACCTTAATTA AGCATTATTT ACTGGAATTT CCCAACGAAT ATCTAAAGCA GCAGGCGTAC
CTTAATCCTC ATCCTAAGGA GCTAAGGCTA AGGTATGGCT ATTAA
 
Protein sequence
MDKKLNIGIS ACVMGENVRY DSGHKRSQFC TEALSEFANF KAFCPEVAIG LPIPRPTIRQ 
IIKDNIITVS RPDGSGDVTE KLTAYGKQVG EQISHLSGFI FCAKSPSCGM ERVKVHHHHG
KGSESNGVGL FAREVMKANP LLPAEENGRL NDAVIRENFM TRVFTYQKWL DLAASGITKH
KLIQFHSEQK YLVMSHHIES YRQLGTLLGS SDLALDELAN QYIAGLMEAL KNKASRKSHT
NTLHHLQGYF KKQLDHAKRQ ELTEQIDAYR LGLTPLLVPL TLIKHYLLEF PNEYLKQQAY
LNPHPKELRL RYGY