| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2739 |
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| Symbol | |
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| ID | 6117047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3355414 |
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| End bp | 3356082 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634279 |
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| Product | ribonuclease T |
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| Protein accession | YP_001761110 |
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| Protein GI | 170727084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000161836 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000451945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAATGA GCGATATTTG CGACGCCAAT AAATTAAGTC ACCGTTTTCG AGGCTACTTC
CCCGTTGTCA TAGATGTTGA AACAGCGGGC TTCAATGCCC AAACAGATGC GTTGCTAGAG
ATCGCAGTCA CCATGCTCAA AATGGATGAT GAAGGTATCC TAAGTTTAGA CAAAACTTTG
CATTTTCACA TTGAACCTTT CGAAGGTGCT AACCTTGAAC CAGAAGCTCT GGCTTTTACA
GGGATAGATC CAACTAACCC TTTACGCGGC GCTGTCAGTG AAAAAGAAGC ATTTCTTGAG
ATCTTTAAAG AGGTCAAAAA GGCTCAAAAG GCAGCCGGTT GCCATCGAAG CATTATTGTT
GCCCATAATG CAGCTTTTGA TCATGGTTTT GTCTCCCAGG CCATTGAGCG ATGTGCGCTA
AAGCGAACCC CTTTCCACCC TTTTGCCACC TTTGATACCG CAGCCCTCTC TGGACTAGCC
TTAGGTCATA CTGTTCTAGC GAAAGCTTGT GCTATTGCAG GGATCCCCTT TGATAACAGC
GAGGCGCATT CAGCACTTTA TGACACAGAG CGTACAGCTG AACTATTCTG TTTGATTGTA
AACCGCTGGA AAGCATTAGG TGGATGGCCA ATAGCCATAG ATGAGGAGAG TAAAGAGGAG
CAGGAGTAG
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| Protein sequence | MLMSDICDAN KLSHRFRGYF PVVIDVETAG FNAQTDALLE IAVTMLKMDD EGILSLDKTL
HFHIEPFEGA NLEPEALAFT GIDPTNPLRG AVSEKEAFLE IFKEVKKAQK AAGCHRSIIV
AHNAAFDHGF VSQAIERCAL KRTPFHPFAT FDTAALSGLA LGHTVLAKAC AIAGIPFDNS
EAHSALYDTE RTAELFCLIV NRWKALGGWP IAIDEESKEE QE
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