Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2738 |
Symbol | |
ID | 6117046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3354409 |
End bp | 3355278 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634278 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001761109 |
Protein GI | 170727083 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00376202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000469935 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGGCTAA GAGTATTACT GGCGTTAACG TTATTTCTGC CTCTGACTGG GAGTGCGGAA TTACGCCACT ATGTTGCCTC TTTGGATCAG TCTGAGTGGA AGTTAAGTGG CAACACGCCG ATAATGTGTC GTCTTGAGCA TGATATTCCT GCATACGGAA AAGCAGTATT CACCAGCACT GCGGGTAAAG ATCATAATCT CAACTTCAGT TTAGATATGT GGGTGAAACC AGATCAGGTG ACTCAAGCTA AATTGATGAG CCTTGCGCCA GCATGGAGGC CCGGTGTTAT CTCTAAAGAG ATCACAGAGC TGACTTATCA AAAATACTTT AGCGGTGAAG TTCCCCGCAA TGCAGCTTGG TCGATGTTAT CTGAGCTTGA ACAGGGTATG CAGCCAACCT TCTATTACGC TGACTGGTAT AATCAAAGTA ATAAAATTGC TGTGGGCTTA TCGGCAGTTA ACTTTAATCG TAAATACAGT GAGTTTAAGT CCTGTTTAGC GAGCCTACTA CCATATAGCT TCGATGATAT CGCCTTTACT GTGCTGACTT ATGAGTTTGG AGGCAAAGAG CTGACGCGAT ACGCAAAGGC GCAGATAGCC AAAGTCCAGG AGTATCTCTC CTATGATCCA GAGGTTGAAC TGGTACTTAT TGATGCCTAT ACCGACAGTT ATGGCGGACG CTCTATCAAT CAGAAGATAT CTGAAGAGCG AGCTGACTCG GTGAAAGAGT TCTTTATCTC AGCAGGCATA ACTCAGGAGC GGATCCACAC AGTTGGACAT GGTGAGCGGC ACCATGTGGC GTCAAATGCG ACTATCGATG AGCGAGCAAG AAACAGACGT GTTGTCATTC GGATAACTAA GCCTATGTAG
|
Protein sequence | MWLRVLLALT LFLPLTGSAE LRHYVASLDQ SEWKLSGNTP IMCRLEHDIP AYGKAVFTST AGKDHNLNFS LDMWVKPDQV TQAKLMSLAP AWRPGVISKE ITELTYQKYF SGEVPRNAAW SMLSELEQGM QPTFYYADWY NQSNKIAVGL SAVNFNRKYS EFKSCLASLL PYSFDDIAFT VLTYEFGGKE LTRYAKAQIA KVQEYLSYDP EVELVLIDAY TDSYGGRSIN QKISEERADS VKEFFISAGI TQERIHTVGH GERHHVASNA TIDERARNRR VVIRITKPM
|
| |