Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2718 |
Symbol | |
ID | 6117017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3325960 |
End bp | 3327177 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634249 |
Product | chitin-binding domain-containing protein |
Protein accession | YP_001761089 |
Protein GI | 170727063 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.279999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00241809 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTCT CTAATTTTAT TAACATCGAG AAATTTATGA AACAGATAAC ATGTTTATCC TCTCTACTTG GTGTCTTGCT TATTAGTAGC GTGTTAACTC AAGAGTTGCA TGCCCACGGC TATATGGATT CACCAAAAGC TCGTCAACAG TTCTGTGTTG ATGATGGCGG CTATTGGTGG CCAGATGATG GCTCCGCAAT CCCTAACTTG GCTTGTAGGG CGGCCTTTTT AGAGACTGGA ACTAAGCAGT TGGTTCAAAA CAATGAATTT TCTGAAAATG TGGTTGATTA TCATAATCTC GCAGCAGTAA AACAGGCGAT CCCAAACGGT CAATTGTGCG CGGGTGGAGA TAGTGAAAAG TCCGGTATGG ATACGCCTTC TATGCATTGG CAACGAACAG ATGTAACTCC TGATAACAAT GGACAAGTCT CCATTATATT TGATGCTCAC ACGCCCCATA ACCCGAGTTT CTGGGAGTTT TATCTGTCTG ATGAGACCTT TGATGTTGCA AATGAGGTGC TCAGCTGGGA GAAGCTGGAG CTAATAACTC AGGTAGGCAA TGTTGGAGTC AGTGAGGTCA ATGGGAAAAA GGTATACCAG ATAATGATCT CTCTTCCTTT GGGTAGAGTA GGGCCCGCAA CTCTGTATAC CCGTTGGCAG CGTGAAGATG CTGCTGGTGA AGGTTTTTAC AACTGCAGTG ACATCAACAT CATTAATGAT TCTCAGCCTC AGGAGTGGGT AGTATTAGAG CAATATATTG CTAATGGGTT AACCGCTAAT AAGGGGGATG AGGTCTGGTT TCGTCTCTTT AGTGCACAAG GTGATGAGCT AGTGTTTGAT AAGTTGCAGG TGACAGCGGC TAACTTACAG ACAGAGTTGT GGGCTCGTCA GCTAGCCGAG TCTGTGATGT CACAACATGG TGAATTAGTG CAGGTTGGTG TTAAGGGAGC CGGTGGTGAG CTGGTTTACT CTGATGACTT AGCGCTAAAT AAAGTCTGGA GTAAACAGTT AGGTATCACC TTTAGGCTCG ATGTGAAAAC CATCAGTGAG CCACCGAGTT GTCAGTTAAT GCCATGGGAT GTGGCTACTG TTTATAACAC AGGTGGAGAG GTCGTCTATG ACTCTATTCG TTACCAAGCA CAGTGGTGGA CGAAAGGGGA TGTGCCATCA AGCTCAGGTG AATGGGGCGT GTGGAAAAAT TTAGGTCCTT GCCTCTAG
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Protein sequence | MSFSNFINIE KFMKQITCLS SLLGVLLISS VLTQELHAHG YMDSPKARQQ FCVDDGGYWW PDDGSAIPNL ACRAAFLETG TKQLVQNNEF SENVVDYHNL AAVKQAIPNG QLCAGGDSEK SGMDTPSMHW QRTDVTPDNN GQVSIIFDAH TPHNPSFWEF YLSDETFDVA NEVLSWEKLE LITQVGNVGV SEVNGKKVYQ IMISLPLGRV GPATLYTRWQ REDAAGEGFY NCSDINIIND SQPQEWVVLE QYIANGLTAN KGDEVWFRLF SAQGDELVFD KLQVTAANLQ TELWARQLAE SVMSQHGELV QVGVKGAGGE LVYSDDLALN KVWSKQLGIT FRLDVKTISE PPSCQLMPWD VATVYNTGGE VVYDSIRYQA QWWTKGDVPS SSGEWGVWKN LGPCL
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