Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2705 |
Symbol | mnmA |
ID | 6117004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3309839 |
End bp | 3310972 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634236 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001761076 |
Protein GI | 170727050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0144876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATAA TCGAACCAAC TGCGGCATTA ATCGAACCCA CTGCTAATAA AAAAGTCATT GTCGGCATGT CCGGCGGTGT TGACTCATCA GTTTCGGCTT ACTTGTTACT TAAACAGGGC TATCAAGTCG AAGGTCTTTT CATGAAAAAC TGGGAAGAAG ATGACACCGA TGAATATTGT GCTGCTGCAG ATGACCTTAA AGACGCGCAA GCGGTATGCG ATAAGCTGGG CATAAAACTG CACACAGTAA ACTTTGCCTC TGAATATTGG GACAATGTTT TCGAATACTT TCTAGCAGAG TACAAGGCAG GCAGAACGCC AAATCCAGAT ATTATCTGTA ATAAAGAGAT AAAATTTAAG GCATTTCTTG AGTTTGCAGA TGATATTTTA GACGCTGACT ACATCGCCAT GGGGCACTAT GTTCGCCGTA GTGATGACAG CGGTCAAAGC CAGATGCTAC GAGGTATCGA CGGCAATAAA GATCAAAGCT ATTTTCTCTA TACACTGAGC CATGAGCAAG TTTCCCGCTC ACTATTTCCT GTCGGTGAGC TTGAAAAAAG TGAAGTCAGG GAGATTGCCA AAGAGATGGG ACTTATCACC CATGATAAAA AAGATAGTAC TGGGATCTGT TTTATCGGTG AGCGTAAGTT CACTGACTTC CTCAGCACCT TCCTGCCTGC ACAGCCTGGT AATATTGAGA CTGCTGAAGG TGAAGTCATT GGAACCCATC AAGGCTTGAT GTATCACACC CTTGGACAGC GTAAAGGTCT AGGGATCGGT GGAATGAAAA ACAGTAACGA TGATCCTTGG TATGTGGTTG ATAAAGAGAT GGACCGCAAT GTATTAGTTG TGGGTCAAGG TGGTAACCAC CCTCGCCTTA TGTCGACGGG TTTTTATGCT GACCAACTTC ACTGGGTTGA CCGTATTGGT CCTGACAATG GCGCAAAAAT TACAGTTAAG ACTCGTTACC GTCAAAGAGA CGTAGCCTGC AGCTTACATT ACGATGGCGA AGACAGGGTA AAAGTACTCT TTGATGAACC TGTTGCAGCA GTGACACCAG GCCAATCAGC CGTTTTTTAT GATGCCGAAG TATGCTTAGG CGGCGGTATC ATCGATTCAC TAATCAGAGA ATAA
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Protein sequence | MAIIEPTAAL IEPTANKKVI VGMSGGVDSS VSAYLLLKQG YQVEGLFMKN WEEDDTDEYC AAADDLKDAQ AVCDKLGIKL HTVNFASEYW DNVFEYFLAE YKAGRTPNPD IICNKEIKFK AFLEFADDIL DADYIAMGHY VRRSDDSGQS QMLRGIDGNK DQSYFLYTLS HEQVSRSLFP VGELEKSEVR EIAKEMGLIT HDKKDSTGIC FIGERKFTDF LSTFLPAQPG NIETAEGEVI GTHQGLMYHT LGQRKGLGIG GMKNSNDDPW YVVDKEMDRN VLVVGQGGNH PRLMSTGFYA DQLHWVDRIG PDNGAKITVK TRYRQRDVAC SLHYDGEDRV KVLFDEPVAA VTPGQSAVFY DAEVCLGGGI IDSLIRE
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