| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2612 |
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| Symbol | |
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| ID | 6116911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3193723 |
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| End bp | 3195276 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634144 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001760984 |
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| Protein GI | 170726958 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00320162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAC AAGTATTTGT AATAGCGGGG GGAATTGCCC TGCTATCTGG TTGTCAGTCT
TTCAATCAAA CGACAAGAGA CACCACAGAA CAAGCTCAGC CACTGGTTCA ACAAGCTGCA
TTATTGCCCC CAGCTATCGA AAAAGCACCG ATTGAGGAGG CCATCGAGAT CAGCGATGTT
TGGCAACGGA TACGTTTAGG ACTAAGCCTT CCTGTTCCCG ATCAAAAGCT GGTTAATCAA
TATCGCGATT GGTATATCAA ACACCCACAG CACCTAGAGC GGGTATCACA AAGAGCCGAG
CCCTTTCTTT ATCTCATTGT TGAAGAGATA GAGAAACGGG ATCTACCCAT TGAGTTAGCC
TTACTTCCAA TTGTCGAGAG CGCCTTTGAC CCCTTTGCAT ACTCCCATGG TGCAGCTTCG
GGTTTATGGC AATTTACCGC CCCTATGGCC AAACATTTCG GACTAGAGAT GAACTGGTGG
TATGACGGAC GCCGTGATGT GCCCGCTGCC ACCATTGCAG CTTTGGATAT GCTCGAATAC
CTCTATAAAA AAACACACGG TAATTGGCTC TACGCAACCG CTGCCTATAA CACAGGAGAG
GGCCGCGTTC TCAATGCCGT CAAGCGCAAT AAAAGACAGG GTAAAGCCAC TGACTTCTGG
TCTTTGGACC TGCCAAGAGA GACGGAGCGT TATGTACCTC AAATGTTGGC TTTGGCAGAG
GTCATAAAAA ATGCAGATAA ATATGGCATT AAACTTATGC CAATTAAAAA CCAACCTCAG
ATCCAAGTTG TGGATATTGG TGGTCAGATA GATCTCGCAT TAGCTGCAGG GATGGCCGGT
ATGACCACCT CTGAACTGCA TAAGCTTAAC CCTGGCTATA ATCAATGGGC AACAGCCCCT
GATGGACCAC ATAAGCTTGT GCTTCCAGTC GATAAAGCAA AAGAGTTTAA CCTTGCATTG
GCTGAAACAA ATCCAGATGA GCGATTAAAC TGGGAAAGGT ATCAAATAAA ATCCGGTGAC
AGTTTAGGCG TGATAGCGAA AAGATACCAC ACTACAGTCC CAGCTCTACG AGCGGTTAAT
GATATAAAGG GCAATACTAT TGTTATAGGT AAGCATCTGC TGATCCCTGT AGCCGCTAAA
TCACCTGAGC AGTACGCTTA TTCGGCAAAC CAAAGGTTAC TGGCTAAGCA AAAAGGAAAA
TCTGGCAATA AAGTTAGCTA TACCGTCCAA GCAGGTGATT CATTTTGGAA AATAGCCAAG
GCACATAAAG TGTCAGTATC TCAGCTGACA AGCTGGAACA ATATGGCTCC AAAAGATGGA
TTGAGAATTG GTAAAAAACT GACTATCTGG ACTGGTGGAA AACAGAAAAC CTCCTCAATC
ACCCGCACTG TTAACTACAC AGTAAGAAAC GGTGATTCCT TAGCTCGTAT TGCGACTAAG
TTTAAGGTGA GTGTGAACGA TCTTGTTCGT TGGAATGCAC TAGAAAAAAG CAAATATATC
CAGCCAGGTC AGAAACTCAA ACTCTTTGTC GATATGAGTA AAGTTCGAGC CTAA
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| Protein sequence | MRIQVFVIAG GIALLSGCQS FNQTTRDTTE QAQPLVQQAA LLPPAIEKAP IEEAIEISDV
WQRIRLGLSL PVPDQKLVNQ YRDWYIKHPQ HLERVSQRAE PFLYLIVEEI EKRDLPIELA
LLPIVESAFD PFAYSHGAAS GLWQFTAPMA KHFGLEMNWW YDGRRDVPAA TIAALDMLEY
LYKKTHGNWL YATAAYNTGE GRVLNAVKRN KRQGKATDFW SLDLPRETER YVPQMLALAE
VIKNADKYGI KLMPIKNQPQ IQVVDIGGQI DLALAAGMAG MTTSELHKLN PGYNQWATAP
DGPHKLVLPV DKAKEFNLAL AETNPDERLN WERYQIKSGD SLGVIAKRYH TTVPALRAVN
DIKGNTIVIG KHLLIPVAAK SPEQYAYSAN QRLLAKQKGK SGNKVSYTVQ AGDSFWKIAK
AHKVSVSQLT SWNNMAPKDG LRIGKKLTIW TGGKQKTSSI TRTVNYTVRN GDSLARIATK
FKVSVNDLVR WNALEKSKYI QPGQKLKLFV DMSKVRA
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