| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2556 |
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| Symbol | |
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| ID | 6116853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3128300 |
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| End bp | 3128878 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634086 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001760928 |
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| Protein GI | 170726902 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.209027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.141209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTATT ATTGGTAAGC ACTGTGCTTG TCAATAATTT TGTATTAGTA
AAATTCCTTG GTCTTTGCCC TTTTATGGGG GTATCCAGCA AGCTTGAGTC AGCCATCGGC
ATGTCTATGG CCACGACTTT TGTTCTCACT TTAGCCTCAA TCTTGAGCTA TCTGGTAAAC
CAATACCTGC TTTTACCCTT TGAACTCGGT TACCTAAGAA CAATGAGCTT CATTTTGGTG
ATCGCCGTCG TCGTTCAATT TACAGAGATG GTCGTACAGA AAACCAGTGC TTCTCTGTAC
CGCGCATTAG GTATCTACCT ACCTTTGATC ACCACTAACT GTGCTGTATT AGGTGTTGCA
CTGCTTAATA TCAATGAAAA ACATGGTTTT GTTGAGTCTG CCATTTATGG TTTTGGCGCT
GCAGTCGGTT TCTCTCTTGT TCTTATTTTA TTTTCAGCCA TGCGCGAACG ACTGGCTGCT
GCCGATGTTC CCCTTCCGTT TAAAGGCGGC GCAATCGCAA TGATCACAGC AGGACTCATG
TCTCTGGCAT TTATGGGCTT TACTGGGTTG GTTAATTAA
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| Protein sequence | MSEYLLLLVS TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVN
QYLLLPFELG YLRTMSFILV IAVVVQFTEM VVQKTSASLY RALGIYLPLI TTNCAVLGVA
LLNINEKHGF VESAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPLPFKGG AIAMITAGLM
SLAFMGFTGL VN
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