| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2479 |
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| Symbol | |
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| ID | 6116754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3026202 |
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| End bp | 3027488 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633987 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001760851 |
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| Protein GI | 170726825 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00110643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000482447 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAGATC CAAAATTTTT GCGTAATGAA TTAGAGGCAA CGGCGGAAAG CCTAGCCACC
CGTGGTTTTA TTCTGGATGT AGAGCGTCTG AGTAAGTTAG AGGAAAAGCG TAAGTCACTT
CAGGTGGCTA CCGAAGAGCT ACAGGCTTCC CGTAATGCCA TCTCTAAATC TATTGGACAA
GCAAAAGCAA AAGGTGAGGA TGTTGCGCCT ATTATGGCTC AAGTTGGTGA CCTTGGCTCG
CAACTTGATT CTAAGAAAGC AGAGCTTGCT GAGCTTCTAG AAGAGCTAAA CGCAATTGCA
CTGAGCGTAC CTAATCTACC TGATGCATCT GCACCAATCG GCAAAGATGA GAGCGAGAAT
GTTGAAGTTC GCCGCTGGGG CACAATTAAA GAGTACGGCT TTGAGGTTAA AGACCATGTT
GAACTTGGTG AAACTTTAGG CGGCTTAGAC TTTAAGTCAG CAGTTAAGAT CACGGGTTCT
CGTTTCATTA TCATGAAAGG CCAAATTGCG CGTATGCACA GAGCATTAGC CCAATTTATG
CTAGATCTGC ACACGACAGA GCATGGTTAT ACTGAAACTT ATGTTCCTTT ATTAGTCAAC
GAAGATAGCT TGATGGGAAC AGGTCAACTA CCAAAATTTG GTGAAGACCT TTTCCACACT
AAACCTGCAA CTGAAGAGGG GCAGGGACTG AGCCTTATTC CGACAGCTGA GGTGCCGCTG
ACTAATATCG CTCGTGATAC CATCATAGAT GAAGCTGAGC TGCCTGTTAA GCTCACCGCT
CATACGCCTT GCTTCAGAAG TGAAGCGGGA TCCTACGGTC GTGATACTCG CGGTCTTATT
CGCCAACATC AATTTGATAA GGTTGAGCTT GTCCAGCTAG TGAAGCCTGA AGATTCAATG
GCGGCGCTAG ATGCGTTAAC TGGCCACGCC GAAAAGGTAC TTGAGAAACT TGGTCTGCCA
TACCGCACCG TTATTCTATG TACCGGTGAT ATGGGTTTTG GTTCAAGTAA AACTTTCGAT
ATTGAAGTGT GGTTGCCAGC GCAAAATACA TACAGAGAGA TCTCATCTTG CAGTAATATG
CAGGACTTCC AGGCTCGCCG TATGCAAGCG CGTTATAAAG CTGCTGATGC TAAGAAACCA
GCTTTACTGC ATACCTTAAA TGGCTCAGGT TTGGCTGTTG GACGTACTTT AGTTGCTGTG
CTTGAAAACT ATCAGAATGA AGATGGATCA ATTACAGTAC CAGAGGTTCT TCGCCCATAC
ATGGGTGGAT TAGAGAAGAT TGGTTAA
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| Protein sequence | MLDPKFLRNE LEATAESLAT RGFILDVERL SKLEEKRKSL QVATEELQAS RNAISKSIGQ
AKAKGEDVAP IMAQVGDLGS QLDSKKAELA ELLEELNAIA LSVPNLPDAS APIGKDESEN
VEVRRWGTIK EYGFEVKDHV ELGETLGGLD FKSAVKITGS RFIIMKGQIA RMHRALAQFM
LDLHTTEHGY TETYVPLLVN EDSLMGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNIARDTIID EAELPVKLTA HTPCFRSEAG SYGRDTRGLI RQHQFDKVEL VQLVKPEDSM
AALDALTGHA EKVLEKLGLP YRTVILCTGD MGFGSSKTFD IEVWLPAQNT YREISSCSNM
QDFQARRMQA RYKAADAKKP ALLHTLNGSG LAVGRTLVAV LENYQNEDGS ITVPEVLRPY
MGGLEKIG
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