| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2459 |
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| Symbol | |
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| ID | 6116733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3004795 |
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| End bp | 3005442 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633966 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001760831 |
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| Protein GI | 170726805 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.593208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATAG ATACCATTAT ATTGTTCGCG GGGATCGTTT TCCTCATTGC TATTATTCCT
GGGCCTAACG CCTTACTCGT GCTCTTTACT GCATTGACTA AAAGTCGTAT GCAGGCATTT
AGTAATATAG CAGGCGTCAG CATTGGCTTT GTTGTCCATG CTTTTATCTC TGCACAGGGC
TTGAGCTTGT TATTGAGCCA ATCTACTTTT GCCTTTACCT TGTTTAAATG GCTTGGAGTC
GGTTATCTGC TGTGGCTGGG GATAACAAAT ATACGTGCAG GTTTGAAAAC CAAAATGCTC
ACTCTCCCTA CTATGAAAAC TGAGGCAGCA GGTAAGTCGC AAGCAAGGGA AGGGCTTATG
GGGAACTTTA TTAAGGGTTT TCTAACCAAT ATGCTTAACC CTAAAATCGT ACTTTTCTAT
CTGTCGATAT TCCCGCAATT TGTTTCACCT CAAACCGTGT TGGCTGACAG TATGTTATTG
GGGGTAACCC AGGCCATTGT GGTTTCTGCT TGGTTTCTAG TGGTTATTTT ACTGGCTGAG
CAGTTTAAGG TATTTCTCAC CAATGCAAAA ACCGCCAAGT GGATGAACTA TGCTGCAGGC
AGTCTTTTTC TAGGTTTTGG GGCTAAACTC GCTACCGCTA AACTCTAG
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| Protein sequence | MNIDTIILFA GIVFLIAIIP GPNALLVLFT ALTKSRMQAF SNIAGVSIGF VVHAFISAQG
LSLLLSQSTF AFTLFKWLGV GYLLWLGITN IRAGLKTKML TLPTMKTEAA GKSQAREGLM
GNFIKGFLTN MLNPKIVLFY LSIFPQFVSP QTVLADSMLL GVTQAIVVSA WFLVVILLAE
QFKVFLTNAK TAKWMNYAAG SLFLGFGAKL ATAKL
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