| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2457 |
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| Symbol | |
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| ID | 6116731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3002747 |
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| End bp | 3003631 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633964 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001760829 |
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| Protein GI | 170726803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.156102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATT TAAGAATCAA GAGCAGTGGA GAGGAGGTGA AAAGCCTTCA GGAGTTACTC
ACAGTACTCC ATCTAAGCCC TGGACCAATT GATGGTGAAT TTGGAGATAA AACGGAGGAT
GCCGTTTTAC AATTTCAGGA ACAACAGGGT TTATATGCCG ATGGTGTTGT TGGAACTATC
ACTTGGAATG CGTTAAAAAA AGCGGCTGTG GTGCAGCTAG ATGAACAAAA CCAACCCTCA
GTAGAATCAG ATAGACTAAT GAGTTGGCAA CGGGTTGCAG CAGATCCTTA TCAAGACGGC
TATAACCGAT TTTATCTGCG TGAAGATGCT GCAAAGGCTT ACCTTCGCGT CTATGAGAAA
GTGAAGCAAG CGGGGGGCTT GTTGACGAGT TCTGGTGCTC GACGCGCGCT TAATGCCGAA
GTTAATCCAT CACGCAGCGC GACCTCTTTT CATTACACAG GTCGAGCGTT AGATCTCTTT
GTCGGCAGCG GAATGAAAAA AACCAAAACC GATCCCTTTA TCATCTCCTC TGATGGCGAT
AGGTTATGGC GTGTGTATGC CCGAGCCGAG GAGGGGGAGC AGATGGATAT AGAAGCGATC
ACTTATGATT CTAGACAGAG AGGAAAGTTA GTGACTGGTC GGTTTGTTGA TCTGACATCC
CTGTTTAAAG AGGAGGGGTT TGAGCGGATC CGTGCTCGGC GCTCTTTTTT TAAGGGTGGA
AGCTGGTTAG GTGCTGAGTG GTGGCACTTT CAATATGAGG AGGGGTTGGA AAAGGGGAAG
TCAACGTTTG GTAATGAACT CTTAAAAGTC TACCGTGAAC AGACCCTAAA TTTGACACCT
GTATGGCAAT ATCGACACTA TATTTTTGGA GATAAGTGGA ATTAA
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| Protein sequence | MMNLRIKSSG EEVKSLQELL TVLHLSPGPI DGEFGDKTED AVLQFQEQQG LYADGVVGTI
TWNALKKAAV VQLDEQNQPS VESDRLMSWQ RVAADPYQDG YNRFYLREDA AKAYLRVYEK
VKQAGGLLTS SGARRALNAE VNPSRSATSF HYTGRALDLF VGSGMKKTKT DPFIISSDGD
RLWRVYARAE EGEQMDIEAI TYDSRQRGKL VTGRFVDLTS LFKEEGFERI RARRSFFKGG
SWLGAEWWHF QYEEGLEKGK STFGNELLKV YREQTLNLTP VWQYRHYIFG DKWN
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